RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 REP15Q6BDI9 236 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ARSKQ6UWY0 536 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 APOOLQ6UXV4 268 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ERASQ7Z444 233 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 MISPQ8IVT2 679 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 CCDC36Q8IYA8 594 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 TEX9Q8N6V9 391 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 NFAM1Q8NET5 270 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 TTYH2Q9BSA4 534 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 DPH5Q9H2P9 285 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 TSPY26PQ9H489 355 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 RNF41Q9H4P4 317 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 ELL3Q9HB65 397 aaPredicted RBP4.04□□□□□ -1.76
LSM5-209ENST00000468872 FAM114A2Q9NRY5 505 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 PAK5Q9P286 719 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 EPS15L1Q9UBC2 864 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 MLXQ9UH92 298 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 CIDEBQ9UHD4 219 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 STYXL1Q9Y6J8 313 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 U3KQV3 271 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 FGD6Q6ZV73 1430 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 UACAQ9BZF9 1416 aa4.04□□□□□ -1.76
LSM5-209ENST00000468872 ADGBQ8N7X0 1667 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 SYNMO15061 1565 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 A0A087WZY1 265 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 LRIT2A6NDA9 550 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 PDLIM1O00151 329 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 MCF2LO15068 1137 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 SDC3O75056 442 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 PDE5AO76074 875 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 GUCA1CO95843 209 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 IGSF6O95976 241 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 GOT2P00505 430 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 RENP00797 406 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 IGHV3-13P01766 116 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 PTMAP06454 111 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 HOXD4P09016 255 aaPredicted RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 SLC35G4P0C7Q5 338 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 HSD17B1P14061 328 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 CYP2F1P24903 491 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 MDH1P40925 334 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 SLC7A2P52569 658 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 NOP14P78316 857 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 GSTO1P78417 241 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 MRPS6P82932 125 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 ZP4Q12836 540 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 VWA2Q5GFL6 755 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 DMKNQ6E0U4 476 aaPredicted RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 LEG1Q6P5S2 330 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 ZNF562Q6V9R5 426 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 PRSS48Q7RTY5 328 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 P4HA3Q7Z4N8 544 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 LRRC49Q8IUZ0 686 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 CENPSQ8N2Z9 138 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 CSNK1G2-AS1Q8NCQ2 148 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 TSGA13Q96PP4 275 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 ATOH8Q96SQ7 321 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 SOSTQ9BQB4 213 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 FAM173AQ9BQD7 235 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 RBM24Q9BX46 236 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 KAT8Q9H7Z6 458 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 ESM1Q9NQ30 184 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 RCOR3Q9P2K3 495 aaPredicted RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 MRPL11Q9Y3B7 192 aaKnown RBP4.03□□□□□ -1.76
LSM5-209ENST00000468872 WDR90Q96KV7 1748 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 RALGAPBQ86X10 1494 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 FHAD1B1AJZ9 1412 aa4.03□□□□□ -1.76
LSM5-209ENST00000468872 ABCA5Q8WWZ7 1642 aa4.03□□□□□ -1.77
LSM5-209ENST00000468872 FBLL1A6NHQ2 334 aaKnown RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 ACOD1A6NK06 481 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 ALOX15BO15296 676 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 MT-ND1P03886 318 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 HEXBP07686 556 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 MELTFP08582 738 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 ANXA4P09525 319 aaPredicted RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 HOXB7P09629 217 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 ADRA1AP35348 466 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 HTR5AP47898 357 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 CSRP3P50461 194 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 MFAP2P55001 183 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 LMO4P61968 165 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 PPIAP62937 165 aaKnown RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 C14orf28Q4W4Y0 310 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 HSP90AA5PQ58FG0 334 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 PNCKQ6P2M8 343 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 ABRAXAS1Q6UWZ7 409 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 FAM43BQ6ZT52 329 aaPredicted RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 STOX1Q6ZVD7 989 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 NET1Q7Z628 596 aaPredicted RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 VPS36Q86VN1 386 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 OR52J3Q8NH60 311 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms