RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 VPS29Q9UBQ0 182 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
RPP40-204ENST00000468105 SLC6A5Q9Y345 797 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 PTGDR2Q9Y5Y4 395 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 CLCA3PQ9Y6N3 262 aa12.39□□□□□ -0.43
RPP40-204ENST00000468105 TRIM3O75382 744 aaPredicted RBP12.38□□□□□ -0.43
RPP40-204ENST00000468105 CLPSP04118 112 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 LBPP18428 481 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 EPHA3P29320 983 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 SKP1P63208 163 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
RPP40-204ENST00000468105 MPEG1Q2M385 716 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 LSM12Q3MHD2 195 aaKnown RBP12.38□□□□□ -0.43
RPP40-204ENST00000468105 ATP6AP1LQ52LC2 224 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 TMEM35AQ53FP2 167 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 FBXW10Q5XX13 1052 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 SLC22A10Q63ZE4 541 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 OPN5Q6U736 354 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 SPATA19Q7Z5L4 167 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 CCDC197Q8NCU1 140 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 SRFBP1Q8NEF9 429 aaKnown RBP12.38□□□□□ -0.43
RPP40-204ENST00000468105 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 FCRL1Q96LA6 429 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 OR52B2Q96RD2 323 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 F2RL3Q96RI0 385 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 HBEGFQ99075 208 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 MAPKAP1Q9BPZ7 522 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 PRDM14Q9GZV8 571 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 C1orf109Q9NX04 203 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 AHSPQ9NZD4 102 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 PCDHGB3Q9Y5G1 929 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 NPFFR2Q9Y5X5 522 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 ROS1P08922 2347 aa12.38□□□□□ -0.43
RPP40-204ENST00000468105 RAI1Q7Z5J4 1906 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 C15orf38-AP3S2A0A0A6YYH1 394 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 GOLGA8QA0A0J9YX86 632 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 GOLGA8OA6NCC3 632 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 URADA6NGE7 173 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 AHRRA9YTQ3 701 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 GOLGA8NF8WBI6 632 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 RTCAO00442 366 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 FGF17O60258 216 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 PRKRAO75569 313 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 TGFB1P01137 390 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 PEX19P40855 299 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 ERVK-8P63133 956 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 KCNJ2P63252 427 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 EMX2Q04743 252 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 TBL3Q12788 808 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 CAPRIN1Q14444 709 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 KIAA0040Q15053 153 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 AP5B1Q2VPB7 878 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 EIPR1Q53HC9 387 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 SPIN4Q56A73 249 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 C6orf136Q5SQH8 315 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 KHDRBS2Q5VWX1 349 aaKnown RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 NSUN5P2Q63ZY6 315 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 METTL4Q8N3J2 472 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 UCN3Q969E3 161 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 NTNG2Q96CW9 530 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 SPACA9Q96E40 222 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 C11orf24Q96F05 449 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 WDYHV1Q96HA8 205 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 SENP5Q96HI0 755 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 JSRP1Q96MG2 331 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 RILPQ96NA2 401 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 UBQLN3Q9H347 655 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 ASIC5Q9NY37 505 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 C6orf203Q9P0P8 240 aaPredicted RBP12.37□□□□□ -0.43
RPP40-204ENST00000468105 EDARQ9UNE0 448 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 SLC12A4Q9UP95 1085 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 TRIM33Q9UPN9 1127 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 MED12LQ86YW9 2145 aa12.37□□□□□ -0.43
RPP40-204ENST00000468105 MBD3L4A6NDZ8 208 aaPredicted RBP12.36□□□□□ -0.43
RPP40-204ENST00000468105 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
RPP40-204ENST00000468105 MBD3L5A6NJ08 208 aaPredicted RBP12.36□□□□□ -0.43
RPP40-204ENST00000468105 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 EEF1E1O43324 174 aaKnown RBP12.36□□□□□ -0.43
RPP40-204ENST00000468105 B3GALT2O43825 422 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 PEX11AO75192 247 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 NID1P14543 1247 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 BMP7P18075 431 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 TNNI3P19429 210 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 MRPL19P49406 292 aaKnown RBP12.36□□□□□ -0.43
RPP40-204ENST00000468105 SORDQ00796 357 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 TGM3Q08188 693 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 SPDYAQ5MJ70 313 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 NXNQ6DKJ4 435 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 VASNQ6EMK4 673 aa12.36□□□□□ -0.43
RPP40-204ENST00000468105 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms