RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 NSUN5P2Q63ZY6 315 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 NOXRED1Q6NXP6 359 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 FAM180BQ6P0A1 224 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 ANGPTL8Q6UXH0 198 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 LRRN4CLQ8ND94 238 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 SIMC1Q8NDZ2 872 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 FAM83FQ8NEG4 500 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 EPS8L3Q8TE67 593 aaKnown RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 KAT2AQ92830 837 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 ABTB1Q969K4 478 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 TMBIM1Q969X1 311 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 NODALQ96S42 347 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 EBPLQ9BY08 206 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 UCK2Q9BZX2 261 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 ROPN1BQ9BZX4 212 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 CALHM2Q9HA72 323 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 ROPN1Q9HAT0 212 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 FOLH1BQ9HBA9 442 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 HHATLQ9HCP6 504 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 C1orf109Q9NX04 203 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 MRTO4Q9UKD2 239 aaKnown RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 C19orf53Q9UNZ5 99 aaPredicted RBP9.45□□□□□ -0.9
SSR3-205ENST00000467789 TMED5Q9Y3A6 229 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 CCL27Q9Y4X3 112 aa9.45□□□□□ -0.9
SSR3-205ENST00000467789 SMIM23A6NLE4 172 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 GNB5O14775 395 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 AZIN1O14977 448 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 TSPAN2O60636 221 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 TBX19O60806 448 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 SEC22BO75396 215 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 JUNP05412 331 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 FGF4P08620 206 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 DDX5P17844 614 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 BMP7P18075 431 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 SERPINB5P36952 375 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ADH7P40394 386 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 PTGDSP41222 190 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 NCBP2P52298 156 aaKnown RBP eCLIP9.44□□□□□ -0.93e-7■□□□□ 9.1
SSR3-205ENST00000467789 PSMD4P55036 377 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 PCLAFQ15004 111 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 KIAA0040Q15053 153 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ZNHIT3Q15649 155 aaPredicted RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 FBXL19-AS1Q494R0 122 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 EMBQ6PCB8 327 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 LARP4Q71RC2 724 aaKnown RBP eCLIP9.44□□□□□ -0.93e-7■□□□□ 8.4
SSR3-205ENST00000467789 PLCZ1Q86YW0 608 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 SLC44A2Q8IWA5 706 aaPredicted RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 C4orf33Q8N1A6 199 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 OR2L13Q8N349 312 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 BANPQ8N9N5 519 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 OR7G2Q8NG99 324 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ZPLD1Q8TCW7 415 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 APOPT1Q96IL0 206 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ZFP3Q96NJ6 502 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ADOQ96SZ5 270 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 CCT7Q99832 543 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ZNF559Q9BR84 538 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 UGT2B28Q9BY64 529 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 OR2B2Q9GZK3 357 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ANKZF1Q9H8Y5 726 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 C3orf14Q9HBI5 128 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 EML4Q9HC35 981 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 SDHAF3Q9NRP4 125 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 DDX18Q9NVP1 670 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 LGALS13Q9UHV8 139 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ABCG2Q9UNQ0 655 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 OR10H1Q9Y4A9 318 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 POLR3HQ9Y535 204 aaPredicted RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 WIF1Q9Y5W5 379 aa9.44□□□□□ -0.9
SSR3-205ENST00000467789 ANKHD1Q8IWZ3 2542 aaKnown RBP9.44□□□□□ -0.9
SSR3-205ENST00000467789 POLQO75417 2590 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 TLDC2A0PJX2 215 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 MBD3L4A6NDZ8 208 aaPredicted RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 MBD3L3A6NE82 208 aaPredicted RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 MBD3L5A6NJ08 208 aaPredicted RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 UPK1AO00322 258 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 SYT5O00445 386 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 NPHS1O60500 1241 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 PSMG1O95456 288 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 CHMP24386 653 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 SRD5A2P31213 254 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 ASCL1P50553 236 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 CORO7P57737 925 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 EEF1A1P68104 462 aaKnown RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 PSG6Q00889 435 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 IFFO1Q0D2I5 559 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 ZNF155Q12901 538 aaPredicted RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 DECR1Q16698 335 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 VPS26BQ4G0F5 336 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 EIPR1Q53HC9 387 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 WIPI1Q5MNZ9 446 aaPredicted RBP9.43□□□□□ -0.9
SSR3-205ENST00000467789 EEF1A1P5Q5VTE0 462 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 FAM219BQ5XKK7 198 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 WDR93Q6P2C0 686 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 AAGABQ6PD74 315 aa9.43□□□□□ -0.9
SSR3-205ENST00000467789 NPSR1Q6W5P4 371 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms