RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RPS26P62854 115 aaKnown RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FUT7Q11130 342 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DUSP8Q13202 625 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CLN3Q13286 438 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LASP1Q14847 261 aaKnown RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 SAXO2Q658L1 398 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 GPR155Q7Z3F1 870 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 C6orf120Q7Z4R8 191 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 RNF130Q86XS8 419 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR52R1Q8NGF1 315 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR14A16Q8NHC5 309 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 SFXN5Q8TD22 340 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 KIAA1143Q96AT1 154 aaPredicted RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 NEURL3Q96EH8 262 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FBXL20Q96IG2 436 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LPAR4Q99677 370 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FAM117AQ9C073 453 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 C3orf14Q9HBI5 128 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 SPAG4Q9NPE6 437 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 NDE1Q9NXR1 346 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 NTMQ9P121 344 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 PACSIN3Q9UKS6 424 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 C19orf53Q9UNZ5 99 aaPredicted RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 NINQ8N4C6 2090 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LOC102723996A0A087X1L8 192 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 IGHV1-45A0A0A0MS14 117 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FUOMA2VDF0 154 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 SAGE2PA6NJ88 616 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CENPBD1B2RD01 187 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 ICMTO60725 284 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CREG1O75629 220 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CLPSP04118 112 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 IGKV3-11P04433 115 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LYNP07948 512 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 COX6A1P12074 109 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 MVDP53602 400 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 PCOLCEQ15113 449 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 COX20Q5RI15 118 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 BHLHB9Q6PI77 547 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 WDR53Q7Z5U6 358 aaPredicted RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 KIF2BQ8N4N8 673 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 RNF148Q8N7C7 305 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 APCDD1LQ8NCL9 501 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 B3GNT7Q8NFL0 401 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR11G2Q8NGC1 345 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR8J3Q8NGG0 315 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR56A1Q8NGH5 318 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FBXO30Q8TB52 745 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF721Q8TF20 911 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 FGF11Q92914 225 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 TMEM125Q96AQ2 219 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 MOAP1Q96BY2 351 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 MS4A4EQ96PG1 132 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CDRT15Q96T59 188 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 OR10A5Q9H207 317 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LRMDAQ9H2I8 198 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 EPS8L2Q9H6S3 715 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 CMTM6Q9NX76 183 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 STOML1Q9UBI4 398 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 ABCD2Q9UBJ2 740 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 BCAP29Q9UHQ4 241 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DTX4Q9Y2E6 619 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DSPP15924 2871 aaKnown RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 EVPLLA8MZ36 301 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 NME4O00746 187 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 PCDH17O14917 1159 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 TLX3O43711 291 aaPredicted RBP6.37□□□□□ -1.39
SCAF4-204ENST00000467731 PSMG1O95456 288 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 IGHEP01854 428 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 CRATP43155 626 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 GPR143P51810 404 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 SLC37A1P57057 533 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 VAC14Q08AM6 782 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 RGNQ15493 299 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 DNAL1Q4LDG9 190 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 TNFAIP8L2Q6P589 184 aaPredicted RBP6.37□□□□□ -1.39
SCAF4-204ENST00000467731 ASRGL1Q7L266 308 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 PPP1R32Q7Z5V6 425 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF615Q8N8J6 731 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 NFAM1Q8NET5 270 aaPredicted RBP6.37□□□□□ -1.39
SCAF4-204ENST00000467731 OR5D16Q8NGK9 328 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 OR1N1Q8NGS0 311 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 OR10A6Q8NH74 314 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 C16orf52Q8NHV5 167 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 JADE3Q92613 823 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 NCLNQ969V3 563 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 OTUB1Q96FW1 271 aaPredicted RBP6.37□□□□□ -1.39
SCAF4-204ENST00000467731 C16orf58Q96GQ5 468 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 SLC35G5Q96KT7 338 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 DHRS9Q9BPW9 319 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 NEURL2Q9BR09 285 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 YIPF4Q9BSR8 244 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 PIF1Q9H611 641 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 KAT8Q9H7Z6 458 aaKnown RBP6.37□□□□□ -1.39
SCAF4-204ENST00000467731 NEK6Q9HC98 313 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 ARMC1Q9NVT9 282 aa6.37□□□□□ -1.39
SCAF4-204ENST00000467731 ADA2Q9NZK5 511 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms