RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ZNHIT3Q15649 155 aaPredicted RBP23.8■■□□□ 1.4
PDCD4-205ENST00000467574 PDCD4Q53EL6 469 aaKnown RBP23.8■■□□□ 1.4
PDCD4-205ENST00000467574 DOPEY1Q5JWR5 2465 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 FGD2Q7Z6J4 655 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 SLC22A16Q86VW1 577 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 CDRT4Q8N9R6 151 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 FBXO30Q8TB52 745 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 PRR7Q8TB68 274 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 SFXN5Q8TD22 340 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 EFHD2Q96C19 240 aaPredicted RBP23.8■■□□□ 1.4
PDCD4-205ENST00000467574 C16orf58Q96GQ5 468 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 ZNF703Q9H7S9 590 aaPredicted RBP23.8■■□□□ 1.4
PDCD4-205ENST00000467574 Q9N2J8 555 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 ZFP64Q9NPA5 681 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 SDR39U1Q9NRG7 319 aaPredicted RBP23.8■■□□□ 1.4
PDCD4-205ENST00000467574 CBLCQ9ULV8 474 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 SNX8Q9Y5X2 465 aa23.8■■□□□ 1.4
PDCD4-205ENST00000467574 GXYLT2A0PJZ3 443 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 ACOT7O00154 380 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 EDF1O60869 148 aaKnown RBP23.79■■□□□ 1.4
PDCD4-205ENST00000467574 RFPL3SP0C7P2 107 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 ZFP36L2P47974 494 aaKnown RBP23.79■■□□□ 1.4
PDCD4-205ENST00000467574 CCT3P49368 545 aaKnown RBP23.79■■□□□ 1.4
PDCD4-205ENST00000467574 PNLIPRP2P54317 469 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 MYO7BQ6PIF6 2116 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 ANKRD46Q86W74 232 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 SLC16A11Q8NCK7 471 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 TCF7L2Q9NQB0 619 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 GPATCH2Q9NW75 528 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 BOKQ9UMX3 212 aaPredicted RBP23.79■■□□□ 1.4
PDCD4-205ENST00000467574 OSGIN2Q9Y236 505 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 HRH3Q9Y5N1 445 aa23.79■■□□□ 1.4
PDCD4-205ENST00000467574 USP9YO00507 2555 aaPredicted RBP23.79■■□□□ 1.4
PDCD4-205ENST00000467574 PRAMEF25A6NGN4 478 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 ADAM10O14672 748 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 UBDO15205 165 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 HMGN2P05204 90 aaKnown RBP23.78■■□□□ 1.4
PDCD4-205ENST00000467574 STSP08842 583 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 IL12BP29460 328 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 GABRA3P34903 492 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 MAGEA5P43359 124 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 AQP5P55064 265 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 EFR3AQ14156 821 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 LASP1Q14847 261 aaKnown RBP23.78■■□□□ 1.4
PDCD4-205ENST00000467574 DUSP5Q16690 384 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 GSTA3Q16772 222 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 HSP90B2PQ58FF3 399 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 ZCCHC12Q6PEW1 402 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 ACAD11Q709F0 780 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 GHDCQ8N2G8 530 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 FAM109AQ8N4B1 249 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 OR56A1Q8NGH5 318 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 PIK3R3Q92569 461 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 ZNF597Q96LX8 424 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 METTL7AQ9H8H3 244 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 GALNT9Q9HCQ5 603 aa23.78■■□□□ 1.4
PDCD4-205ENST00000467574 FAM120CQ9NX05 1096 aaKnown RBP23.78■■□□□ 1.4
PDCD4-205ENST00000467574 PRSS51A0A1B0GVH4 220 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 CFLARO15519 480 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 ZNHIT1O43257 154 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 SEMA7AO75326 666 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 SNX4O95219 450 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 IL33O95760 270 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 IGKV1D-16P01601 117 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 CELA3AP09093 270 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 CYP4B1P13584 511 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 S100A3P33764 101 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 KRT20P35900 424 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 DGKQP52824 942 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 SNTA1Q13424 505 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 ANXA8L1Q5VT79 327 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 OR5AK3PQ8NH89 298 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 SLC9A6Q92581 669 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 OTUB1Q96FW1 271 aaPredicted RBP23.77■■□□□ 1.4
PDCD4-205ENST00000467574 TMEM41AQ96HV5 264 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 YIPF4Q9BSR8 244 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 CCDC28BQ9BUN5 200 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 OSBPL11Q9BXB4 747 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 FLRT3Q9NZU0 649 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 ZIM2Q9NZV7 527 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 ZNF835Q9Y2P0 537 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 LIPGQ9Y5X9 500 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 PCNX1Q96RV3 2341 aa23.77■■□□□ 1.4
PDCD4-205ENST00000467574 SPTBN1Q01082 2364 aaKnown RBP23.77■■□□□ 1.4
PDCD4-205ENST00000467574 PCNX3Q9H6A9 2034 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 POLR3GO15318 223 aaPredicted RBP23.76■■□□□ 1.39
PDCD4-205ENST00000467574 ICOSLGO75144 302 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 PGRP06401 933 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 MRPL19P49406 292 aaKnown RBP23.76■■□□□ 1.39
PDCD4-205ENST00000467574 MAN2A2P49641 1150 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 PRIM2P49643 509 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 MRPS22P82650 360 aaKnown RBP23.76■■□□□ 1.39
PDCD4-205ENST00000467574 TP53BP2Q13625 1128 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 DECR1Q16698 335 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 VPS26BQ4G0F5 336 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 SLC30A6Q6NXT4 461 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 ARFGAP2Q8N6H7 521 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 GLB1L3Q8NCI6 653 aaPredicted RBP23.76■■□□□ 1.39
PDCD4-205ENST00000467574 OR4A15Q8NGL6 344 aa23.76■■□□□ 1.39
PDCD4-205ENST00000467574 OR9I1Q8NGQ6 314 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms