RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TANKQ92844 425 aa8.35□□□□□ -1.07
APP-213ENST00000464867 FBXL8Q96CD0 374 aa8.35□□□□□ -1.07
APP-213ENST00000464867 GMPPAQ96IJ6 420 aaPredicted RBP8.35□□□□□ -1.07
APP-213ENST00000464867 CCDC42Q96M95 316 aa8.35□□□□□ -1.07
APP-213ENST00000464867 MAPKAP1Q9BPZ7 522 aa8.35□□□□□ -1.07
APP-213ENST00000464867 RPF2Q9H7B2 306 aaKnown RBP8.35□□□□□ -1.07
APP-213ENST00000464867 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
APP-213ENST00000464867 MS4A12Q9NXJ0 267 aa8.35□□□□□ -1.07
APP-213ENST00000464867 FKBP7Q9Y680 259 aa8.35□□□□□ -1.07
APP-213ENST00000464867 DPRXA6NFQ7 191 aa8.34□□□□□ -1.07
APP-213ENST00000464867 EFCAB8A8MWE9 144 aa8.34□□□□□ -1.07
APP-213ENST00000464867 VWC2LB2RUY7 222 aa8.34□□□□□ -1.07
APP-213ENST00000464867 IFNB1P01574 187 aa8.34□□□□□ -1.07
APP-213ENST00000464867 C1GALT1C1LP0DN25 315 aa8.34□□□□□ -1.07
APP-213ENST00000464867 GNAZP19086 355 aa8.34□□□□□ -1.07
APP-213ENST00000464867 FABP6P51161 128 aa8.34□□□□□ -1.07
APP-213ENST00000464867 HADHBP55084 474 aaKnown RBP8.34□□□□□ -1.07
APP-213ENST00000464867 RWDD2BP57060 319 aa8.34□□□□□ -1.07
APP-213ENST00000464867 HILS1P60008 231 aa8.34□□□□□ -1.07
APP-213ENST00000464867 ASTE1Q2TB18 679 aaPredicted RBP8.34□□□□□ -1.07
APP-213ENST00000464867 AP5B1Q2VPB7 878 aa8.34□□□□□ -1.07
APP-213ENST00000464867 ADPRMQ3LIE5 342 aa8.34□□□□□ -1.07
APP-213ENST00000464867 FBLN7Q53RD9 439 aa8.34□□□□□ -1.07
APP-213ENST00000464867 ZNF470Q6ECI4 717 aa8.34□□□□□ -1.07
APP-213ENST00000464867 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
APP-213ENST00000464867 ZNF793Q6ZN11 406 aa8.34□□□□□ -1.07
APP-213ENST00000464867 DEF8Q6ZN54 512 aa8.34□□□□□ -1.07
APP-213ENST00000464867 DGAT2L6Q6ZPD8 337 aa8.34□□□□□ -1.07
APP-213ENST00000464867 GBP7Q8N8V2 638 aaPredicted RBP8.34□□□□□ -1.07
APP-213ENST00000464867 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
APP-213ENST00000464867 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
APP-213ENST00000464867 VPS39Q96JC1 886 aa8.34□□□□□ -1.07
APP-213ENST00000464867 DHRS9Q9BPW9 319 aa8.34□□□□□ -1.07
APP-213ENST00000464867 TBCDQ9BTW9 1192 aa8.34□□□□□ -1.07
APP-213ENST00000464867 KIFC1Q9BW19 673 aa8.34□□□□□ -1.07
APP-213ENST00000464867 TSGA10Q9BZW7 698 aa8.34□□□□□ -1.07
APP-213ENST00000464867 FOLH1BQ9HBA9 442 aa8.34□□□□□ -1.07
APP-213ENST00000464867 PRDM7Q9NQW5 492 aa8.34□□□□□ -1.07
APP-213ENST00000464867 GLRX2Q9NS18 164 aa8.34□□□□□ -1.07
APP-213ENST00000464867 MED29Q9NX70 200 aa8.34□□□□□ -1.07
APP-213ENST00000464867 XPR1Q9UBH6 696 aa8.34□□□□□ -1.07
APP-213ENST00000464867 SLC22A14Q9Y267 594 aa8.34□□□□□ -1.07
APP-213ENST00000464867 IGHV4-61A0A0C4DH41 118 aa8.33□□□□□ -1.08
APP-213ENST00000464867 KRTAP4-8A0A0G2JLE6 195 aa8.33□□□□□ -1.08
APP-213ENST00000464867 LOC390937A0A1W2PQ73 354 aa8.33□□□□□ -1.08
APP-213ENST00000464867 PRAMEF25A6NGN4 478 aa8.33□□□□□ -1.08
APP-213ENST00000464867 SHISA9B4DS77 424 aa8.33□□□□□ -1.08
APP-213ENST00000464867 ABCD4O14678 606 aa8.33□□□□□ -1.08
APP-213ENST00000464867 SMAD9O15198 467 aaKnown RBP8.33□□□□□ -1.08
APP-213ENST00000464867 COL6A2P12110 1019 aa8.33□□□□□ -1.08
APP-213ENST00000464867 CTNNA1P35221 906 aaKnown RBP8.33□□□□□ -1.08
APP-213ENST00000464867 RBMXP38159 391 aaKnown RBP8.33□□□□□ -1.08
APP-213ENST00000464867 CLDN15P56746 228 aa8.33□□□□□ -1.08
APP-213ENST00000464867 SLBPQ14493 270 aaKnown RBP eCLIP8.33□□□□□ -1.08
APP-213ENST00000464867 ZBTB37Q5TC79 503 aa8.33□□□□□ -1.08
APP-213ENST00000464867 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
APP-213ENST00000464867 RAET1LQ5VY80 246 aa8.33□□□□□ -1.08
APP-213ENST00000464867 C11orf71Q6IPW1 123 aa8.33□□□□□ -1.08
APP-213ENST00000464867 C11orf63Q6NUN7 778 aa8.33□□□□□ -1.08
APP-213ENST00000464867 ZNF549Q6P9A3 640 aa8.33□□□□□ -1.08
APP-213ENST00000464867 USP43Q70EL4 1123 aa8.33□□□□□ -1.08
APP-213ENST00000464867 SSX8Q7RTT4 187 aa8.33□□□□□ -1.08
APP-213ENST00000464867 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
APP-213ENST00000464867 ACOT4Q8N9L9 421 aa8.33□□□□□ -1.08
APP-213ENST00000464867 C17orf47Q8NEP4 570 aa8.33□□□□□ -1.08
APP-213ENST00000464867 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
APP-213ENST00000464867 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
APP-213ENST00000464867 MUCL1Q96DR8 90 aa8.33□□□□□ -1.08
APP-213ENST00000464867 LINGO1Q96FE5 620 aa8.33□□□□□ -1.08
APP-213ENST00000464867 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
APP-213ENST00000464867 NODALQ96S42 347 aa8.33□□□□□ -1.08
APP-213ENST00000464867 POTEKPQ9BYX7 375 aa8.33□□□□□ -1.08
APP-213ENST00000464867 PITHD1Q9GZP4 211 aaPredicted RBP8.33□□□□□ -1.08
APP-213ENST00000464867 MYOZ1Q9NP98 299 aaPredicted RBP8.33□□□□□ -1.08
APP-213ENST00000464867 FBXO6Q9NRD1 293 aaPredicted RBP8.33□□□□□ -1.08
APP-213ENST00000464867 FBXO34Q9NWN3 711 aa8.33□□□□□ -1.08
APP-213ENST00000464867 FBXL2Q9UKC9 423 aa8.33□□□□□ -1.08
APP-213ENST00000464867 CLEC4AQ9UMR7 237 aa8.33□□□□□ -1.08
APP-213ENST00000464867 MED16Q9Y2X0 877 aa8.33□□□□□ -1.08
APP-213ENST00000464867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
APP-213ENST00000464867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
APP-213ENST00000464867 ZIC3O60481 467 aa8.32□□□□□ -1.08
APP-213ENST00000464867 SS18L1O75177 396 aaPredicted RBP8.32□□□□□ -1.08
APP-213ENST00000464867 AQP8O94778 261 aa8.32□□□□□ -1.08
APP-213ENST00000464867 GYPCP04921 128 aa8.32□□□□□ -1.08
APP-213ENST00000464867 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
APP-213ENST00000464867 ATP5A1P25705 553 aaKnown RBP8.32□□□□□ -1.08
APP-213ENST00000464867 CNTFP26441 200 aa8.32□□□□□ -1.08
APP-213ENST00000464867 GALNSP34059 522 aa8.32□□□□□ -1.08
APP-213ENST00000464867 CHN2P52757 468 aa8.32□□□□□ -1.08
APP-213ENST00000464867 SUCLG1P53597 346 aaKnown RBP8.32□□□□□ -1.08
APP-213ENST00000464867 DSCR4P56555 118 aaPredicted RBP8.32□□□□□ -1.08
APP-213ENST00000464867 PLCXD2Q0VAA5 305 aa8.32□□□□□ -1.08
APP-213ENST00000464867 SFRP5Q5T4F7 317 aa8.32□□□□□ -1.08
APP-213ENST00000464867 GTF2IRD2BQ6EKJ0 949 aa8.32□□□□□ -1.08
APP-213ENST00000464867 OR5M10Q6IEU7 315 aa8.32□□□□□ -1.08
APP-213ENST00000464867 SLC22A25Q6T423 547 aa8.32□□□□□ -1.08
APP-213ENST00000464867 RBM43Q6ZSC3 357 aaKnown RBP8.32□□□□□ -1.08
APP-213ENST00000464867 ATG4DQ86TL0 474 aaPredicted RBP8.32□□□□□ -1.08
APP-213ENST00000464867 GTF2IRD2Q86UP8 949 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms