RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GPR52Q9Y2T5 361 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 COL4A4P53420 1690 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 A0A1W2PQ09 198 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 TRAPPC2P0DI81 140 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 TRAPPC2BP0DI82 140 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 PVRP15151 417 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 RFX2P48378 723 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 PRR5P85299 388 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 MAP4K2Q12851 820 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GALEQ14376 348 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 PRRT3Q5FWE3 981 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 CLVS2Q5SYC1 327 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 C10orf62Q5T681 223 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 LHFPL5Q8TAF8 219 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 SETD6Q8TBK2 473 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 PCNPQ8WW12 178 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ERVMER34-1Q9H9K5 563 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ACER3Q9NUN7 267 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 B3GNT2Q9NY97 397 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 XIRP2A4UGR9 3374 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 A0A1W2PS29 197 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CLCA1A8K7I4 914 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SLC35G6P0C7Q6 338 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ADORA3P0DMS8 318 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 NT5EP21589 574 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 BCL6P41182 706 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 RPS7P62081 194 aaKnown RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CCDC85BQ15834 202 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 C6orf132Q5T0Z8 1188 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 FRMPD2BQ6IN97 320 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ARMC6Q6NXE6 501 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SMARCD3Q6STE5 483 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ADAMTSL4Q6UY14 1074 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CREB3L2Q70SY1 520 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 AKAP1Q92667 903 aaKnown RBP eCLIP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 RELTQ969Z4 430 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 HDAC8Q9BY41 377 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 NFKBIL1Q9UBC1 381 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ENOPH1Q9UHY7 261 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 PADI2Q9Y2J8 665 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ARHGEF17Q96PE2 2063 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 GCM2O75603 506 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CHMP24386 653 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 BSGP35613 385 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 RUNX1T1Q06455 604 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ZMAT1Q5H9K5 638 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 PLET1Q6UQ28 207 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 PATE1Q8WXA2 126 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 MTERF3Q96E29 417 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 PDXPQ96GD0 296 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 HRASLS5Q96KN8 279 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 GDF15Q99988 308 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SPATA9Q9BWV2 254 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 POLR2J2Q9GZM3 115 aaKnown RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 TMEM168Q9H0V1 697 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CFL2Q9Y281 166 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 IFNA16P05015 189 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 JUNDP17535 347 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 IL1RNP18510 177 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 C1DQ13901 141 aaKnown RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 IRF3Q14653 427 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 LTB4RQ15722 352 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 ANKRD54Q6NXT1 300 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SHFQ7M4L6 423 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 TAF8Q7Z7C8 310 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 CYP4Z2PQ8N1L4 340 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 OR4M1Q8NGD0 313 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 OR2M4Q96R27 311 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SDHCQ99643 169 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 TRIM45Q9H8W5 580 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-203ENST00000460265 STARD5Q9NSY2 213 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 SLC23A1Q9UHI7 598 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 PCDHGA2Q9Y5H1 932 aa14.5□□□□□ -0.09
LMNB1-203ENST00000460265 KIAA0513O60268 411 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 KCNJ13O60928 360 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 WBP4O75554 376 aaKnown RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 TLX1P31314 330 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 STXBP1P61764 594 aaKnown RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 FGL2Q14314 439 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 GINS1Q14691 196 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 BAK1Q16611 211 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 PDZK1Q5T2W1 519 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 XKRXQ6PP77 449 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 RTL10Q7L3V2 364 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CCDC71Q8IV32 467 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 OR2A1Q8NGT9 310 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 SPATA5L1Q9BVQ7 753 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 ZFR2Q9UPR6 939 aaKnown RBP14.49□□□□□ -0.09
LMNB1-203ENST00000460265 OR6C74A6NCV1 312 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 PTHP01270 115 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 ACSL1P33121 698 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CRYBA2P53672 197 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 PPP2CBP62714 309 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 PPP2CAP67775 309 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 IKBIPQ70UQ0 350 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 CCDC190Q86UF4 302 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 NUP43Q8NFH3 380 aa14.49□□□□□ -0.09
LMNB1-203ENST00000460265 RERGQ96A58 199 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms