RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 APEX1P27695 318 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 NDUFS1P28331 727 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TEAD1P28347 426 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CMPK1P30085 196 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 WEE1P30291 646 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PKLRP30613 574 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 HTR1FP30939 366 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 AHRP35869 848 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 HTR2BP41595 481 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 AVPR1BP47901 424 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC6A11P48066 632 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PITPNBP48739 271 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 EVX1P49640 407 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MAN2A2P49641 1150 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 GZMKP49863 264 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RNF144AP50876 292 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RAB28P51157 221 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 EPHA5P54756 1037 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 AP3S2P59780 193 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RAB14P61106 215 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RRAS2P62070 204 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FABP5Q01469 135 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 C19orf57Q0VDD7 668 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 POU4F2Q12837 409 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLAMF1Q13291 335 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TNK1Q13470 666 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PIN1Q13526 163 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 LASP1Q14847 261 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 DHCR24Q15392 516 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FAM214AQ32MH5 1076 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 HNRNPA1L2Q32P51 320 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF658BQ4V348 819 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 YIF1BQ5BJH7 314 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZMAT1Q5H9K5 638 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SNAP47Q5SQN1 464 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 IDNKQ5T6J7 187 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR2G6Q5TZ20 316 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SDE2Q6IQ49 451 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PYHIN1Q6K0P9 492 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 KIAA1161Q6NSJ0 714 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 LILRA6Q6PI73 481 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CD200R1LQ6Q8B3 271 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PAQR6Q6TCH4 344 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF322Q6U7Q0 402 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM107Q6UX40 140 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF782Q6ZMW2 699 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MBOAT2Q6ZWT7 520 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ANKRD33Q7Z3H0 272 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZER1Q7Z7L7 766 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MRGPREQ86SM8 312 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 LRRC28Q86X40 367 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RBM45Q8IUH3 476 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLITRK4Q8IW52 837 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CCDC28AQ8IWP9 274 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TRIM48Q8IWZ4 208 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ADGRF3Q8IZF5 1079 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 RNF113BQ8IZP6 322 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC43A2Q8N370 569 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FAM109AQ8N4B1 249 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TOMM5Q8N4H5 51 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 C2orf73Q8N5S3 287 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ACBD7Q8N6N7 88 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 CELF5Q8N6W0 485 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF655Q8N720 491 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 YIPF7Q8N8F6 280 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SYT14Q8NB59 555 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM145Q8NBT3 493 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MORN4Q8NDC4 146 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF740Q8NDX6 193 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 DUSP18Q8NEJ0 188 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 NUP43Q8NFH3 380 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 VN1R2Q8NFZ6 395 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR5D16Q8NGK9 328 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR6T1Q8NGN1 323 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR5M3Q8NGP4 307 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR2L8Q8NGY9 312 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SUN5Q8TC36 379 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FANK1Q8TC84 345 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 DEDD2Q8WXF8 326 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SORCS1Q8WY21 1168 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 GAL3ST3Q96A11 431 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ARRDC3Q96B67 414 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC41A3Q96GZ6 507 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MED30Q96HR3 178 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FAM46AQ96IP4 442 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 C12orf66Q96MD2 445 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC6A18Q96N87 628 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 PRAP1Q96NZ9 151 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR2M2Q96R28 347 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 OR7D2Q96RA2 312 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 FERD3LQ96RJ6 166 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SECISBP2Q96T21 854 aaKnown RBP3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZIC5Q96T25 663 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 MCHR1Q99705 422 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 TM9SF2Q99805 663 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 ATF6BQ99941 703 aa3.13□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLX1AQ9BQ83 275 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms