RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ENPP7Q6UWV6 458 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 GDPD3Q7L5L3 318 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 PRICKLE2Q7Z3G6 844 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 TM4SF19Q96DZ7 209 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 C6orf106Q9H6K1 298 aaPredicted RBP17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 SEMA4GQ9NTN9 838 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 KCMF1Q9P0J7 381 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 SEC14L4Q9UDX3 406 aa17.22■□□□□ 0.35
SEMA3B-209ENST00000456560 SMIM10L1P0DMW3 83 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 HOXB2P14652 356 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 SMSP52788 366 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 TAS2R41P59536 307 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 DEFA1P59665 94 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 DEFA3P59666 94 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 RGS1Q08116 209 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 NFATC4Q14934 902 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 TRAM2Q15035 370 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 CCDC190Q86UF4 302 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 CCL4L1Q8NHW4 92 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 SMIM10Q96HG1 83 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 LRR1Q96L50 414 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 TP63Q9H3D4 680 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 NEK6Q9HC98 313 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 MRPS18AQ9NVS2 196 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 NDUFB11Q9NX14 153 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 CA5BQ9Y2D0 317 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 PCDHGB6Q9Y5F9 930 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 GOLGA4Q13439 2230 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 TICRRQ7Z2Z1 1910 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 FRS3O43559 492 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 KLF8O95600 359 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 PRKAR1BP31321 381 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 MLLT11Q13015 90 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 RSBN1Q5VWQ0 802 aaPredicted RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 TRIM69Q86WT6 500 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 MEX3DQ86XN8 651 aaKnown RBP17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 OR7G2Q8NG99 324 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 ASPNQ9BXN1 380 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 SRMSQ9H3Y6 488 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 ANKRD19PQ9H560 264 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 EGLN3Q9H6Z9 239 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 SCML1Q9UN30 329 aa17.21■□□□□ 0.35
SEMA3B-209ENST00000456560 CCNKO75909 580 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 RAB36O95755 333 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 APOA1P02647 267 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 COPZ1P61923 177 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TNFRSF17Q02223 184 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TSPAN31Q12999 210 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TCEA2Q15560 299 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 SNAPC1Q16533 368 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 C6orf132Q5T0Z8 1188 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 MFSD12Q6NUT3 480 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 C16orf62Q7Z3J2 963 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 GJD3Q8N144 294 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 OR8D4Q8NGM9 314 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TMEM163Q8TC26 289 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC22A18Q96BI1 424 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 WDR92Q96MX6 357 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 POLR2J2Q9GZM3 115 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 NUAK2Q9H093 628 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 STUB1Q9UNE7 303 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 A6NCN8 305 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 FAM170BA6NMN3 283 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 H0Y8X5 98 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TNFSF14O43557 240 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 FCMRO60667 390 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 EGFP01133 1207 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TRHRP34981 398 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 IFNGR2P38484 337 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 RPS19P39019 145 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 PDX1P52945 283 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 KIR2DS3Q14952 304 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 FAM111BQ6SJ93 734 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 RASSF6Q6ZTQ3 369 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 SPATC1Q76KD6 591 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 LRRC25Q8N386 305 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 CELF2-AS1Q8N7Q2 184 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TSACCQ96A04 125 aaPredicted RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 MRPL38Q96DV4 380 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 SIPA1Q96FS4 1042 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 TRMT61AQ96FX7 289 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 BMFQ96LC9 184 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 OR2A14Q96R47 310 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 OR2A5Q96R48 311 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 ZNF576Q9H609 170 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 EXOSC4Q9NPD3 245 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 SLC13A4Q9UKG4 626 aa17.2■□□□□ 0.34
SEMA3B-209ENST00000456560 CPSF4LA6NMK7 179 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 CTDSP2O14595 271 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 SNX4O95219 450 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 NTN1O95631 604 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 APBB3O95704 486 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 KRT8P05787 483 aa17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 PSMA1P25786 263 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-209ENST00000456560 ETV5P41161 510 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms