RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 EIF4HQ15056 248 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 RGNQ15493 299 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DUSP6Q16828 381 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM132AQ24JP5 1023 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 INTS6LQ5JSJ4 861 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 LRRC73Q5JTD7 316 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC30A6Q6NXT4 461 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DNAJB7Q7Z6W7 309 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TSPAN33Q86UF1 283 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CLDN22Q8N7P3 220 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PPHLN1Q8NEY8 458 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 RPLP0P6Q8NHW5 317 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 IPCEF1Q8WWN9 437 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM169Q96HH4 297 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF578Q96N58 590 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PIGUQ9H490 435 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TBC1D17Q9HA65 648 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CCNB1IP1Q9NPC3 277 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF230Q9UIE0 474 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ATPIF1Q9UII2 106 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 STOML2Q9UJZ1 356 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 KCND3Q9UK17 655 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB23Q9ULC3 237 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 FER1L5A0AVI2 2057 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CASTOR2A6NHX0 329 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MAGEB17A8MXT2 336 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 M0QZQ0 153 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 INSIG1O15503 277 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 EEF1E1O43324 174 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 VEGFDO43915 354 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ANXA9O76027 345 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 UBXN7O94888 489 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CLUP10909 449 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 AOAHP28039 575 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TCTE1Q5JU00 501 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MANEAQ5SRI9 462 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 GPRC6AQ5T6X5 926 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 C9orf131Q5VYM1 1079 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 USP30Q70CQ3 517 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SSX6Q7RTT6 188 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF454Q8N9F8 522 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM163Q8TC26 289 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MRPL48Q96GC5 212 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 AHCYL2Q96HN2 611 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SECISBP2Q96T21 854 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PBX4Q9BYU1 374 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM245Q9H330 911 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 IL21RQ9HBE5 538 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MIOXQ9UGB7 285 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 FZD4Q9ULV1 537 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZFR2Q9UPR6 939 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 RASD1Q9Y272 281 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PRELID3BQ9Y3B1 194 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CMAHPQ9Y471 501 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SGK494L7N484 410 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 M0R3H8 397 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SAP18O00422 153 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PDCD5O14737 125 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HIST1H2AGP0C0S8 130 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 VSIG10L2P0DP72 767 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 JUPP14923 745 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF44P15621 663 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HIST1H2ADP20671 130 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 S100A3P33764 101 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PLA2G5P39877 138 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RORCP51449 518 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CLDN12P56749 244 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MLLT1Q03111 559 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ITKQ08881 620 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF169Q14929 603 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 QPRTQ15274 297 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NTRK2Q16620 822 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 LDLRAD1Q5T700 205 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 AADACL4Q5VUY2 407 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 C18orf63Q68DL7 685 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HIST2H2AA3Q6FI13 130 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PLBD1Q6P4A8 553 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RTN4RL2Q86UN3 420 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ATAD1Q8NBU5 361 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR6T1Q8NGN1 323 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HIST1H2AHQ96KK5 128 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HIST1H2AJQ99878 128 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 THAP7Q9BT49 309 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 DOHHQ9BU89 302 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TMED9Q9BVK6 235 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NUSAP1Q9BXS6 441 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TTTY10Q9BZA0 68 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SMOC1Q9H4F8 434 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MED20Q9H944 212 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 STARD7Q9NQZ5 370 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TVP23BQ9NYZ1 205 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CLEC4EQ9ULY5 219 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 GPR55Q9Y2T6 319 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 DHRS7Q9Y394 339 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ANKRD11Q6UB99 2663 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 A0A087WUU8 490 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 hCG_1807616A0A1W2PRN6 198 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB19A4D1S5 217 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MANBAO00462 879 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms