RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CXCL12P48061 93 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 NFATC3Q12968 1075 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 MINDY4Q4G0A6 757 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 P2RY8Q86VZ1 359 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 OR52R1Q8NGF1 315 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 GGHQ92820 318 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 TANKQ92844 425 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 ORAI3Q9BRQ5 295 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 BTBD2Q9BX70 525 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 MTHFD2LQ9H903 347 aaPredicted RBP12.76□□□□□ -0.37
CLK3-203ENST00000454830 FBXO34Q9NWN3 711 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 LRIT1Q9P2V4 623 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 TLX2O43763 284 aaPredicted RBP12.76□□□□□ -0.37
CLK3-203ENST00000454830 AGR2O95994 175 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 CT62P0C5K7 136 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 MMP11P24347 488 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 CAPZBP47756 277 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 DHPSP49366 369 aaPredicted RBP12.76□□□□□ -0.37
CLK3-203ENST00000454830 TMBIM6P55061 237 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 VBP1P61758 197 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 GINS1Q14691 196 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 ZNHIT3Q15649 155 aaPredicted RBP12.76□□□□□ -0.37
CLK3-203ENST00000454830 SNAPC1Q16533 368 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 GALNT12Q8IXK2 581 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 VWA5B2Q8N398 1253 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 FAM46AQ96IP4 442 aaKnown RBP12.76□□□□□ -0.37
CLK3-203ENST00000454830 PDE7BQ9NP56 450 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 ACOT13Q9NPJ3 140 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 PTGFRNQ9P2B2 879 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
CLK3-203ENST00000454830 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 CLCA1A8K7I4 914 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 CLDN4O14493 209 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 OXSR1O95747 527 aaPredicted RBP12.75□□□□□ -0.37
CLK3-203ENST00000454830 CD36P16671 472 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 ST3GAL3Q11203 375 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 INAVAQ3KP66 663 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 DCST2Q5T1A1 773 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 DNAJC22Q8N4W6 341 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 APOBEC4Q8WW27 367 aaKnown RBP12.75□□□□□ -0.37
CLK3-203ENST00000454830 ZNF566Q969W8 418 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 GIMAP5Q96F15 307 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 PRTFDC1Q9NRG1 225 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 MAT2BQ9NZL9 334 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 OR10H1Q9Y4A9 318 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 A0A1B0GVT2 93 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 STX11O75558 287 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 GPR4P46093 362 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 RAB38P57729 211 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 TRAM2Q15035 370 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 ENTPD8Q5MY95 495 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 TTLL10Q6ZVT0 673 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 ZER1Q7Z7L7 766 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 B3GNT7Q8NFL0 401 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 WDR36Q8NI36 951 aaKnown RBP12.75□□□□□ -0.37
CLK3-203ENST00000454830 TEX47Q8TBZ9 253 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 PLEKHA8Q96JA3 519 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 NELL2Q99435 816 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 SDF2Q99470 211 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 ALOXE3Q9BYJ1 711 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 SEMA4GQ9NTN9 838 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 TMEM9Q9P0T7 183 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 C19orf53Q9UNZ5 99 aaPredicted RBP12.75□□□□□ -0.37
CLK3-203ENST00000454830 ZNF443Q9Y2A4 671 aaPredicted RBP12.75□□□□□ -0.37
CLK3-203ENST00000454830 CENPVL1A0A0U1RR11 272 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 GXYLT2A0PJZ3 443 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 HYKKA2RU49 373 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 PEX12O00623 359 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 APOL3O95236 402 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 SSTR4P31391 388 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 IFNGR2P38484 337 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 ENTPD1P49961 510 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 OR1D5P58170 312 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 CSNK2BP67870 215 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 BTG2P78543 158 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 FRRS1Q6ZNA5 592 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 MIPOL1Q8TD10 442 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 RIT1Q92963 219 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 EGLN3Q9H6Z9 239 aa12.75□□□□□ -0.37
CLK3-203ENST00000454830 IGHV5-51A0A0C4DH38 117 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 A0A1B0GVG6 124 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 CYR61O00622 381 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 PRKNO60260 465 aaPredicted RBP12.74□□□□□ -0.37
CLK3-203ENST00000454830 ENTPD6O75354 484 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 BCAS1O75363 584 aaPredicted RBP12.74□□□□□ -0.37
CLK3-203ENST00000454830 EPPINO95925 133 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 LIMS1P48059 325 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 POU6F2P78424 691 aaPredicted RBP12.74□□□□□ -0.37
CLK3-203ENST00000454830 TIGD6Q17RP2 521 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 SLC34A3Q8N130 599 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 CDRT4Q8N9R6 151 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 PIGXQ8TBF5 258 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 DGAT2Q96PD7 388 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 RERGLQ9H628 205 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 BCAT2O15382 392 aaPredicted RBP12.74□□□□□ -0.37
CLK3-203ENST00000454830 ASNA1O43681 348 aa12.74□□□□□ -0.37
CLK3-203ENST00000454830 MAOAP21397 527 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms