RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 GDF15Q99988 308 aa17■□□□□ 0.31
MECP2-205ENST00000453960 POLR2J2Q9GZM3 115 aaKnown RBP17■□□□□ 0.31
MECP2-205ENST00000453960 TRIM45Q9H8W5 580 aaPredicted RBP17■□□□□ 0.31
MECP2-205ENST00000453960 SEMA4GQ9NTN9 838 aa17■□□□□ 0.31
MECP2-205ENST00000453960 KIR2DS5A0A0G2JLQ3 304 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 A0A0G2JNG1 304 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 OR6C74A6NCV1 312 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 KIR2DS3K7RE56 304 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 FCMRO60667 390 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CSO75390 466 aaKnown RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 SEMA4FO95754 770 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ATP1B1P05026 303 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 TLX1P31314 330 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 LSSP48449 732 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TAS2R41P59536 307 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TFF2Q03403 129 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ILF3Q12906 894 aaKnown RBP eCLIP16.99■□□□□ 0.317e-8■■□□□ 13.9
MECP2-205ENST00000453960 DUSP8Q13202 625 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 KIR2DS5Q14953 304 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 C6orf132Q5T0Z8 1188 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ZCCHC12Q6PEW1 402 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 OR52P1PQ8NH57 321 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ACOT11Q8WXI4 607 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 MND1Q9BWT6 205 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 PIGUQ9H490 435 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 KLHL28Q9NXS3 571 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CLDND1Q9NY35 253 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CPNE7Q9UBL6 633 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 SATB2Q9UPW6 733 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ZNF443Q9Y2A4 671 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 UNC80Q8N2C7 3258 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 XIRP2A4UGR9 3374 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 BRWD1Q9NSI6 2320 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 LOC105369274A0A096LPK9 316 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 LOC102723532A0A0G2JNH3 316 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 FUOMA2VDF0 154 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 AGAP5A6NIR3 686 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 C2orf74A8MZ97 194 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 PRAMEF26H0Y7S4 382 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 H0YGG7 62 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CYR61O00622 381 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 PLOD3O60568 738 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 DNAJB6O75190 326 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TNFP01375 233 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ACP2P11117 423 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 PORP16435 677 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 TGM1P22735 817 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TRHRP34981 398 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 ARF3P61204 181 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 PRKCDQ05655 676 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 MED22Q15528 200 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TSTQ16762 297 aaKnown RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 DEFB134Q4QY38 66 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 OR4N4Q8N0Y3 316 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CLIP4Q8N3C7 705 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 POGLUT1Q8NBL1 392 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TMEM163Q8TC26 289 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 FAM3CQ92520 227 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 PMM1Q92871 262 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ZNF582Q96NG8 517 aaPredicted RBP16.99■□□□□ 0.31
MECP2-205ENST00000453960 PLA2G12AQ9BZM1 189 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 ZNF350Q9GZX5 532 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 EQTNQ9NQ60 294 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TMEM74BQ9NUR3 256 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 TVP23BQ9NYZ1 205 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 UGT2A1Q9Y4X1 527 aa16.99■□□□□ 0.31
MECP2-205ENST00000453960 A0A0J9YY10 115 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 TCRBV21S2A2A0A5A6 115 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 UBXN7O94888 489 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 THY1P04216 161 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 HBQ1P09105 142 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 FPR3P25089 353 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 EEF1A1P68104 462 aaKnown RBP16.98■□□□□ 0.31
MECP2-205ENST00000453960 MLLT11Q13015 90 aaPredicted RBP16.98■□□□□ 0.31
MECP2-205ENST00000453960 SPHARQ15513 63 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 DUSP5Q16690 384 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 PUS10Q3MIT2 529 aaKnown RBP16.98■□□□□ 0.31
MECP2-205ENST00000453960 C3orf38Q5JPI3 329 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 PRICKLE2Q7Z3G6 844 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 HMGN2P46Q86SG4 172 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 IQCF1Q8N6M8 205 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 CLDN22Q8N7P3 220 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 OR13H1Q8NG92 308 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 OR8D4Q8NGM9 314 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 CDS1Q92903 461 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 MSANTD3Q96H12 275 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 SDF2Q99470 211 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 GSDMCQ9BYG8 508 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 CLEC2DQ9UHP7 191 aa16.98■□□□□ 0.31
MECP2-205ENST00000453960 TRBV23OR9-2A0A075B6M9 112 aa16.97■□□□□ 0.31
MECP2-205ENST00000453960 IRGMA1A4Y4 181 aa16.97■□□□□ 0.31
MECP2-205ENST00000453960 FAM170BA6NMN3 283 aa16.97■□□□□ 0.31
MECP2-205ENST00000453960 KDM4EB2RXH2 506 aaPredicted RBP16.97■□□□□ 0.31
MECP2-205ENST00000453960 TLX2O43763 284 aaPredicted RBP16.97■□□□□ 0.31
MECP2-205ENST00000453960 GPX5O75715 221 aa16.97■□□□□ 0.31
MECP2-205ENST00000453960 STAT5AP42229 794 aa16.97■□□□□ 0.31
MECP2-205ENST00000453960 BCAP31P51572 246 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms