RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TOMM20Q15388 145 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 HSPB2Q16082 182 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 RFTN2Q52LD8 501 aaPredicted RBP17.66■□□□□ 0.42
USP40-207ENST00000450940 ARL13AQ5H913 290 aaPredicted RBP17.66■□□□□ 0.42
USP40-207ENST00000450940 NSUN5P2Q63ZY6 315 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 TMEM107Q6UX40 140 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 PLCZ1Q86YW0 608 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 LACC1Q8IV20 430 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 CLYBLQ8N0X4 340 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 MREGQ8N565 214 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 OR4N2Q8NGD1 307 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 OR6Y1Q8NGX8 325 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 ABTB1Q969K4 478 aaPredicted RBP17.66■□□□□ 0.42
USP40-207ENST00000450940 SERHLQ9NQF3 203 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 TMED5Q9Y3A6 229 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 TRAF6Q9Y4K3 522 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 WIF1Q9Y5W5 379 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 DOCK7Q96N67 2140 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 POLQO75417 2590 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 KIAA1549Q9HCM3 1950 aa17.66■□□□□ 0.42
USP40-207ENST00000450940 CD8B2A6NJW9 211 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 LSM1O15116 133 aaKnown RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 SLU7O95391 586 aaKnown RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 CHEK2O96017 543 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 CHRNGP07510 517 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 LINC00032P0C843 101 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 CPN1P15169 458 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 SDC1P18827 310 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 CAPN3P20807 821 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 IL12BP29460 328 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 FRKP42685 505 aaPredicted RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 PDE7AQ13946 482 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 DCST1Q5T197 706 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 YRDCQ86U90 279 aaKnown RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 HOXB13Q92826 284 aaPredicted RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 LMF2Q9BU23 707 aaKnown RBP17.65■□□□□ 0.42
USP40-207ENST00000450940 MECRQ9BV79 373 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 REEP4Q9H6H4 257 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 MCCC2Q9HCC0 563 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 MAPRE3Q9UPY8 281 aa17.65■□□□□ 0.42
USP40-207ENST00000450940 PCNX3Q9H6A9 2034 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 CSMD2Q7Z408 3487 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 TTC36A6NLP5 189 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 KDM4EB2RXH2 506 aaPredicted RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 TYROBPO43914 113 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 ZNF500O60304 480 aaPredicted RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 SPAG7O75391 227 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 SERPINB5P36952 375 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 GFRA1P56159 465 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 KRTAP10-9P60411 292 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 TLE4Q04727 773 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 ZNF155Q12901 538 aaPredicted RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 POMZP3Q6PJE2 187 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 NAXEQ8NCW5 288 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 TNIP2Q8NFZ5 429 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 ZPLD1Q8TCW7 415 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 EFHD2Q96C19 240 aaPredicted RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 CALHM2Q9HA72 323 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 EML4Q9HC35 981 aaKnown RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 SLC24A3Q9HC58 644 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 DDX18Q9NVP1 670 aaKnown RBP17.64■□□□□ 0.41
USP40-207ENST00000450940 NTMQ9P121 344 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 KCNN3Q9UGI6 736 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 OR10H1Q9Y4A9 318 aa17.64■□□□□ 0.41
USP40-207ENST00000450940 MBD3L4A6NDZ8 208 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 MBD3L3A6NE82 208 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 MBD3L5A6NJ08 208 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 TMEM233B4DJY2 109 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 B4DXG7 233 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 PDPK1O15530 556 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 FADS1O60427 444 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 CYP4B1P13584 511 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 CREB1P16220 341 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 SRD5A2P31213 254 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 MAP3K8P41279 467 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 ETV4P43268 484 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 DLX5P56178 289 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 GAB1Q13480 694 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 ZNF551Q7Z340 670 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 MBD3L2Q8NHZ7 208 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 TWIST2Q8WVJ9 160 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 MTERF3Q96E29 417 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 DTNBP1Q96EV8 351 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 ZNF629Q9UEG4 869 aaPredicted RBP17.63■□□□□ 0.41
USP40-207ENST00000450940 FBXL2Q9UKC9 423 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 CBLCQ9ULV8 474 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 CAMK2AQ9UQM7 478 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
USP40-207ENST00000450940 ANKRD17O75179 2603 aaKnown RBP17.62■□□□□ 0.41
USP40-207ENST00000450940 SYT5O00445 386 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 IL33O95760 270 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 BCKDHAP12694 445 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 GRK2P25098 689 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 ARRB2P32121 409 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 GCKP35557 465 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 ASMTP46597 345 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 RPL38P63173 70 aaKnown RBP17.62■□□□□ 0.41
USP40-207ENST00000450940 DECR1Q16698 335 aa17.62■□□□□ 0.41
USP40-207ENST00000450940 FBXL19-AS1Q494R0 122 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms