RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FOLH1Q04609 750 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 PDE7AQ13946 482 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM174BQ3ZCQ3 159 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC22A10Q63ZE4 541 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 OR52E8Q6IFG1 317 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF585AQ6P3V2 769 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC15A4Q8N697 577 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 TMEM251Q8N6I4 163 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 KLHL29Q96CT2 875 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 CNRIP1Q96F85 164 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 RBM18Q96H35 190 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 TTYH2Q9BSA4 534 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 MS4A12Q9NXJ0 267 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ZIM2Q9NZV7 527 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 UTS2RQ9UKP6 389 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 MPDZO75970 2070 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 FREM3P0C091 2139 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 CCDC22O60826 627 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 GABRA1P14867 456 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 TLX1P31314 330 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 FEN1P39748 380 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 GSTM5P46439 218 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 MAN2A2P49641 1150 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 WNT3P56703 355 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 C21orf58P58505 322 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 FOXO1Q12778 655 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 HEPACAMQ14CZ8 416 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 TIGD2Q4W5G0 525 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 DGAT2L6Q6ZPD8 337 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 DND1Q8IYX4 353 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 RPRMLQ8N4K4 120 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 POU5F2Q8N7G0 328 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC22A8Q8TCC7 542 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 VPS33AQ96AX1 596 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 ERP27Q96DN0 273 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 SENP5Q96HI0 755 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 ART5Q96L15 291 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 DGAT2Q96PD7 388 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 CCDC106Q9BWC9 280 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
PDLIM2-213ENST00000448520 PRRC2AP48634 2157 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM234BA2RU67 622 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 GLI4P10075 376 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 S100A3P33764 101 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 PEX19P40855 299 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 MAGEA5P43359 124 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 STT3AP46977 705 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 NR0B1P51843 470 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 POLR2JP52435 117 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 IGLV3-21P80748 117 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 LTB4RQ15722 352 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC25A35Q3KQZ1 300 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 CPTPQ5TA50 214 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 SNX32Q86XE0 403 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 CLECL1Q8IZS7 167 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 FITM2Q8N6M3 262 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF321PQ8N8H1 164 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 TANKQ92844 425 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 PPWD1Q96BP3 646 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 TESCQ96BS2 214 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 COQ8BQ96D53 544 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF681Q96N22 645 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 ZBTB18Q99592 522 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC52A3Q9NQ40 469 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC35C2Q9NQQ7 365 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 EHD3Q9NZN3 535 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 WBP11Q9Y2W2 641 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 PCDHGB3Q9Y5G1 929 aa12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
PDLIM2-213ENST00000448520 TRGV5A0A0B4J1U4 118 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 G3V3Y1 287 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 TBX19O60806 448 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 GPR75O95800 540 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 CCL3P10147 92 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 XKP51811 444 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 CLNS1AP54105 237 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 MYBPHQ13203 477 aa12.61□□□□□ -0.39
PDLIM2-213ENST00000448520 ZNF791Q3KP31 576 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms