RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 LSRQ86X29 649 aaPredicted RBP23.07■■□□□ 1.28
RFFL-206ENST00000447669 HOXB13Q92826 284 aaPredicted RBP23.07■■□□□ 1.28
RFFL-206ENST00000447669 VPS50Q96JG6 964 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 ZNF578Q96N58 590 aaPredicted RBP23.07■■□□□ 1.28
RFFL-206ENST00000447669 ZNF607Q96SK3 696 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 STACQ99469 402 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 DDA1Q9BW61 102 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 SPRY4Q9C004 299 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 NTN4Q9HB63 628 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 IL1RAPQ9NPH3 570 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 LIPT1Q9Y234 373 aa23.07■■□□□ 1.28
RFFL-206ENST00000447669 SEC24DO94855 1032 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 KCNK2O95069 426 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 EPPINO95925 133 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 CST1P01037 141 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 FOXD4Q12950 439 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 PUM1Q14671 1186 aaKnown RBP eCLIP23.06■■□□□ 1.28
RFFL-206ENST00000447669 C6orf15Q6UXA7 325 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 C9orf40Q8IXQ3 194 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 BBS10Q8TAM1 723 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 DAZLQ92904 295 aaKnown RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 C7orf34Q96L11 122 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 GAL3ST4Q96RP7 486 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 WDR77Q9BQA1 342 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 MAGIXQ9H6Y5 334 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 PADI1Q9ULC6 663 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 WDR45Q9Y484 360 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 MAGED1Q9Y5V3 778 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 A0A0G2JPF8 293 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 HNRNPCL2B2RXH8 293 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 HNRNPCL3B7ZW38 293 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 PDLIM1O00151 329 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 DLGAP3O95886 979 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 FESP07332 822 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 HNRNPCL4P0DMR1 293 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 FUT4P22083 530 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 POU6F2P78424 691 aaPredicted RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 ATP6AP1Q15904 470 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 GRAMD1BQ3KR37 738 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 IQCCQ4KMZ1 466 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 IRAK1BP1Q5VVH5 260 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 RBM45Q8IUH3 476 aaKnown RBP23.06■■□□□ 1.28
RFFL-206ENST00000447669 OR4D11Q8NGI4 311 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 VNN3Q9NY84 501 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 KCNE5Q9UJ90 142 aa23.06■■□□□ 1.28
RFFL-206ENST00000447669 PTPRBP23467 1997 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 C9J4A7 227 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 J3KTA2 159 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 CASQ2O14958 399 aaPredicted RBP23.05■■□□□ 1.28
RFFL-206ENST00000447669 CLOCKO15516 846 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 DYRK3O43781 588 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 HPCAP84074 193 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 ZNHIT3Q15649 155 aaPredicted RBP23.05■■□□□ 1.28
RFFL-206ENST00000447669 MAPK14Q16539 360 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 LACC1Q8IV20 430 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 OR7G1Q8NGA0 311 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 OR14A16Q8NHC5 309 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 BTBD2Q9BX70 525 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 NXF5Q9H1B4 397 aaKnown RBP23.05■■□□□ 1.28
RFFL-206ENST00000447669 RLIMQ9NVW2 624 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 U3KQV3 271 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 DSPPQ9NZW4 1301 aa23.05■■□□□ 1.28
RFFL-206ENST00000447669 PEX12O00623 359 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 AGR2O95994 175 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 FABP3P05413 133 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 TCN2P20062 427 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 GCKP35557 465 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 VHLP40337 213 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 MAGEA2P43356 314 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 GPR143P51810 404 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 OGFRL1Q5TC84 451 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 PAPD4Q6PIY7 484 aaKnown RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 C16orf47Q6ZP98 133 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 EPHX4Q8IUS5 362 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 METTL25Q8N6Q8 603 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 CHDHQ8NE62 594 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 OR1N1Q8NGS0 311 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 VANGL1Q8TAA9 524 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 CT55Q8WUE5 264 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 ZPBPQ9BS86 351 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 WDR54Q9H977 334 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 ZNF223Q9UK11 482 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 CHST2Q9Y4C5 530 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 PDE9AO76083 593 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 LDLRP01130 860 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 IFNA14P01570 189 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 CSRP1P21291 193 aaKnown RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 KCNJ5P48544 419 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 EIF3IQ13347 325 aaKnown RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 GNA13Q14344 377 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 IFI44LQ53G44 452 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 CPEB2Q7Z5Q1 589 aaKnown RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 KRT73Q86Y46 540 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 NFAM1Q8NET5 270 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 LZICQ8WZA0 190 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 CENPNQ96H22 339 aaPredicted RBP23.04■■□□□ 1.28
RFFL-206ENST00000447669 SLC29A1Q99808 456 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 AMBRA1Q9C0C7 1298 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 ZNF350Q9GZX5 532 aa23.04■■□□□ 1.28
RFFL-206ENST00000447669 OAZ3Q9UMX2 235 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms