RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR2A7Q96R45 310 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 MNTQ99583 582 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 RERGLQ9H628 205 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 KCND3Q9UK17 655 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 CLCA2Q9UQC9 943 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 DHRS7Q9Y394 339 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 CHST2Q9Y4C5 530 aa18.09■□□□□ 0.49
HMGA1-205ENST00000447654 OR6C75A6NL08 312 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 TEX46H3BTG2 121 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ATG12O94817 140 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 IGLV3-27P01718 113 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 POU3F2P20265 443 aaPredicted RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ATP5A1P25705 553 aaKnown RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ACVRL1P37023 503 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 PITPNAQ00169 270 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 LRRC74AQ0VAA2 488 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 BOP1Q14137 746 aaKnown RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 DHRS7BQ6IAN0 325 aaPredicted RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ZC3H14Q6PJT7 736 aaKnown RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 STX12Q86Y82 276 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 PXT1Q8NFP0 134 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 IFT27Q9BW83 186 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 APOL5Q9BWW9 433 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 ZNF334Q9HCZ1 680 aaPredicted RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 PIPOXQ9P0Z9 390 aa18.08■□□□□ 0.49
HMGA1-205ENST00000447654 FNDC3AQ9Y2H6 1198 aaKnown RBP18.08■□□□□ 0.49
HMGA1-205ENST00000447654 SUSD5O60279 629 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 EPB42P16452 691 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 ZNF3P17036 446 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 RGS4P49798 205 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 SEC61A1P61619 476 aaKnown RBP18.08■□□□□ 0.48
HMGA1-205ENST00000447654 SGO1Q5FBB7 561 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 TMUB2Q71RG4 321 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 SKA3Q8IX90 412 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 GPR135Q8IZ08 494 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 CFAP52Q8N1V2 620 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 SVBPQ8N300 66 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 ZNF527Q8NB42 609 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 KAT2AQ92830 837 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 C12orf66Q96MD2 445 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 TCF25Q9BQ70 676 aa18.08■□□□□ 0.48
HMGA1-205ENST00000447654 SPATA6Q9NWH7 488 aaPredicted RBP18.08■□□□□ 0.48
HMGA1-205ENST00000447654 GABRPO00591 440 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 CHST10O43529 356 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 CLDN9O95484 217 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 TACR1P25103 407 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 PREPP48147 710 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 MMP15P51511 669 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 XKP51811 444 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 ZNF124Q15973 351 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 GGTA1PQ4G0N0 100 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 FAM69AQ5T7M9 428 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 KIAA1211LQ6NV74 962 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 NCEH1Q6PIU2 408 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 GSG1LQ6UXU4 331 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 UNC5DQ6UXZ4 953 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 DEF8Q6ZN54 512 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 HUS1BQ8NHY5 278 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 CFHR5Q9BXR6 569 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 MTG2Q9H4K7 406 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 NSUN3Q9H649 340 aaKnown RBP18.07■□□□□ 0.48
HMGA1-205ENST00000447654 SEMA3GQ9NS98 782 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 OR6C2Q9NZP2 312 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 C1orf226A1L170 272 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 LOC730098B7Z3J9 87 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 PRAMEF2O60811 474 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 SRPRAP08240 638 aaKnown RBP18.07■□□□□ 0.48
HMGA1-205ENST00000447654 ACP2P11117 423 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 XKR6Q5GH73 641 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 TEX30Q5JUR7 227 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 SLC30A6Q6NXT4 461 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 BAIAP2L2Q6UXY1 529 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 SLC44A3Q8N4M1 653 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 TCEANCQ8N8B7 351 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 C11orf24Q96F05 449 aaPredicted RBP18.07■□□□□ 0.48
HMGA1-205ENST00000447654 VN1R3Q9BXE9 311 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 ANKRD19PQ9H560 264 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 NANSQ9NR45 359 aa18.07■□□□□ 0.48
HMGA1-205ENST00000447654 OR2M5A3KFT3 312 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 DRGXA6NNA5 263 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 POM121CA8CG34 1229 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 PRRG1O14668 218 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 TLR5O60602 858 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 PQBP1O60828 265 aaKnown RBP18.06■□□□□ 0.48
HMGA1-205ENST00000447654 EFCAB14O75071 495 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 IGHV2-70P01814 119 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 ZDHHC11BP0C7U3 371 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 ZNF806P0C7X5 589 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 PRSS56P0CW18 603 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 PTGER3P43115 390 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 GAS1P54826 345 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 PAN3Q58A45 887 aaKnown RBP18.06■□□□□ 0.48
HMGA1-205ENST00000447654 CRB2Q5IJ48 1285 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 SPOUT1Q5T280 376 aaKnown RBP18.06■□□□□ 0.48
HMGA1-205ENST00000447654 AVPI1Q5T686 147 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 VASNQ6EMK4 673 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 SIAH3Q8IW03 269 aa18.06■□□□□ 0.48
HMGA1-205ENST00000447654 ARMC10Q8N2F6 343 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms