RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 TRILQ7L0X0 811 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 DOLPP1Q86YN1 238 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 FAM57AQ8TBR7 257 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 PIK3R3Q92569 461 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 NTNG2Q96CW9 530 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 FAM120BQ96EK7 910 aaKnown RBP13.57□□□□□ -0.24
HDAC4-204ENST00000446876 C16orf58Q96GQ5 468 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 CCDC120Q96HB5 630 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 MARK4Q96L34 752 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 GNRHR2Q96P88 292 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 MS4A4EQ96PG1 132 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 DUSP26Q9BV47 211 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 DPY30Q9C005 99 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 CXorf36Q9H7Y0 433 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ATAD3AQ9NVI7 634 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 CBLCQ9ULV8 474 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ASH1LQ9NR48 2969 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SPTAN1Q13813 2472 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 HMGB1P1B2RPK0 211 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 NPIPA2E9PIF3 369 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 NPIPA3F8WFD2 350 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 KLF11O14901 512 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 ANKRD28O15084 1053 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 EMC8O43402 210 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SNX4O95219 450 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 IGKV1D-16P01601 117 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 IGHG3P01860 377 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 DDX5P17844 614 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 ENDOUP21128 410 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 GABRA3P34903 492 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 PER3P56645 1201 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 WNT3P56703 355 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 C21orf58P58505 322 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 MLC1Q15049 377 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SLC9B1Q4ZJI4 515 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 MFSD12Q6NUT3 480 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 CLECL1Q8IZS7 167 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 GPR151Q8TDV0 419 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 OR5P2Q8WZ92 322 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SLC9A6Q92581 669 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 RMND5BQ96G75 393 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 TMEM41AQ96HV5 264 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 BHLHE41Q9C0J9 482 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 LDAHQ9H6V9 325 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 EXO5Q9H790 373 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 C3orf14Q9HBI5 128 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 Q9N2J8 555 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SLCO1B3Q9NPD5 702 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 ZCCHC3Q9NUD5 404 aaKnown RBP13.56□□□□□ -0.24
HDAC4-204ENST00000446876 ZNF446Q9NWS9 450 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 NTMQ9P121 344 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 SPRR3Q9UBC9 169 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 MAPRE3Q9UPY8 281 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 PCNX1Q96RV3 2341 aa13.56□□□□□ -0.24
HDAC4-204ENST00000446876 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 USP9YO00507 2555 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 TRPC5OSA6NMA1 111 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 ZNF195O14628 629 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PRRG2O14669 202 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SNPHO15079 494 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 CFLARO15519 480 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SCO2O43819 266 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 ABCB7O75027 752 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 CLDN1O95832 211 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PTPN6P29350 595 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SOAT1P35610 550 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 MAP3K8P41279 467 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 MAN2A2P49641 1150 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PNLIPRP2P54317 469 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PPP2R2AP63151 447 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 HBA1P69905 142 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 EFR3AQ14156 821 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 DUSP5Q16690 384 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 DECR1Q16698 335 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 CYP27C1Q4G0S4 372 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 EMC4Q5J8M3 183 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 OGFOD2Q6N063 350 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SLC30A6Q6NXT4 461 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 TMEM81Q6P7N7 255 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PAOXQ6QHF9 649 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 CAMKMTQ7Z624 323 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 ANKRD46Q86W74 232 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 CLEC4FQ8N1N0 589 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SLC16A11Q8NCK7 471 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 OR5M9Q8NGP3 310 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms