RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
USE1-202ENST00000445667 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
USE1-202ENST00000445667 TTYH2Q9BSA4 534 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 EQTNQ9NQ60 294 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 SERHLQ9NQF3 203 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ACTL7BQ9Y614 415 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 NBPF19A0A087WUL8 3843 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 CRYBG3Q68DQ2 2970 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 TMEM114B3SHH9 223 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 SNPHO15079 494 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 HNRNPRO43390 633 aaKnown RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 ABCB7O75027 752 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 MYZAPP0CAP1 466 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 GLI4P10075 376 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 CYP4B1P13584 511 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 ELAVL4P26378 380 aaKnown RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 MAPK1P28482 360 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 FRKP42685 505 aaPredicted RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 SLC1A6P48664 564 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 PRKAG1P54619 331 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 EFR3AQ14156 821 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 PTGR1Q14914 329 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 PDCD2Q16342 344 aaPredicted RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 B3GNT6Q6ZMB0 384 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 YRDCQ86U90 279 aaKnown RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 ANKRD42Q8N9B4 389 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 FAM83FQ8NEG4 500 aaPredicted RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.25
USE1-202ENST00000445667 TIMP4Q99727 224 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 UCK2Q9BZX2 261 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 FLRT3Q9NZU0 649 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 ATP6V1HQ9UI12 483 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 CBLCQ9ULV8 474 aa13.46□□□□□ -0.25
USE1-202ENST00000445667 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 C17orf51A8MQB3 221 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 SCAMP2O15127 329 aaKnown RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 WDR1O75083 606 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ERLIN1O75477 346 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 CBR3O75828 277 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 LAMP1P11279 417 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 PRPS2P11908 318 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 PRF1P14222 555 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 BMP7P18075 431 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 GABRA3P34903 492 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 RFX3P48380 749 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 ZNHIT3Q15649 155 aaPredicted RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 BEND6Q5SZJ8 279 aaPredicted RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 C1orf185Q5T7R7 199 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ACAD11Q709F0 780 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 SZRD1Q7Z422 152 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 R3HCC1LQ7Z5L2 792 aaKnown RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ULK2Q8IYT8 1036 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 KRTCAP2Q8N6L1 136 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 NUP43Q8NFH3 380 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ASB5Q8WWX0 329 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 SORT1Q99523 831 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 LMF2Q9BU23 707 aaKnown RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 Q9N2J8 555 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 ACSS1Q9NUB1 689 aaPredicted RBP13.45□□□□□ -0.26
USE1-202ENST00000445667 RAP2CQ9Y3L5 183 aa13.45□□□□□ -0.26
USE1-202ENST00000445667 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 NKX2-6A6NCS4 301 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 KDM4EB2RXH2 506 aaPredicted RBP13.44□□□□□ -0.26
USE1-202ENST00000445667 GABRA1P14867 456 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 GRK2P25098 689 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 CHRNB4P30926 498 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 HPCAL1P37235 193 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 ADH7P40394 386 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 RPL14P50914 215 aaKnown RBP13.44□□□□□ -0.26
USE1-202ENST00000445667 GAS1P54826 345 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 PSPHP78330 225 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 STX3Q13277 289 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 DECR1Q16698 335 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 DCST1Q5T197 706 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 VASNQ6EMK4 673 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 CEP70Q8NHQ1 597 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 FBXO30Q8TB52 745 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 GPR151Q8TDV0 419 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 RNF138Q8WVD3 245 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 PIK3R3Q92569 461 aa13.44□□□□□ -0.26
USE1-202ENST00000445667 ABTB1Q969K4 478 aaPredicted RBP13.44□□□□□ -0.26
USE1-202ENST00000445667 GIMAP5Q96F15 307 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms