RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PNLIPRP2P54317 469 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 KCNJ2P63252 427 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 FOXK1P85037 733 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ALDH6A1Q02252 535 aaKnown RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 DUSP5Q16690 384 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 TIGD2Q4W5G0 525 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 AGKQ53H12 422 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 BICRALQ6AI39 1079 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ZNF324BQ6AW86 544 aaPredicted RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ZNF621Q6ZSS3 439 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 MSANTD1Q6ZTZ1 278 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 FUNDC1Q8IVP5 155 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 ADAMTS15Q8TE58 950 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 NR4A3Q92570 626 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 VPS33AQ96AX1 596 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 EFHD2Q96C19 240 aaPredicted RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 OTUB1Q96FW1 271 aaPredicted RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 SLC35A4Q96G79 324 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ITCHQ96J02 903 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 PANX1Q96RD7 426 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ANGPTL4Q9BY76 406 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 RABEP2Q9H5N1 569 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 RMND5AQ9H871 391 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 METTL7AQ9H8H3 244 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 PROK2Q9HC23 129 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 GPATCH2Q9NW75 528 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.32□□□□□ -0.6
USP1-203ENST00000442679 PYCARD-AS1I3L0S3 204 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 J3QKU1 62 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 RFXANKO14593 260 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 SOX30O94993 753 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 IL33O95760 270 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 GSNP06396 782 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 KRT16P08779 473 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 ZNF24P17028 368 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 MATN1P21941 496 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 MST1P26927 711 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 CHI3L1P36222 383 aaPredicted RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 CASP3P42574 277 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 CDKN2CP42773 168 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 RFX3P48380 749 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 PSMD4P55036 377 aaKnown RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 KCNK10P57789 538 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 TBCELQ5QJ74 424 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 EXOSC6Q5RKV6 272 aaKnown RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 CDC73Q6P1J9 531 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 ATCAYQ86WG3 371 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 TRIML2Q8N7C3 387 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 COX18Q8N8Q8 333 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 RMND5BQ96G75 393 aaPredicted RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 SLC35G5Q96KT7 338 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 PHF12Q96QT6 1004 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 NODALQ96S42 347 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 STACQ99469 402 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 SLX1AQ9BQ83 275 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 SLC35A5Q9BS91 424 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 DOHHQ9BU89 302 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 BTBD2Q9BX70 525 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 PIGUQ9H490 435 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 ZNF385DQ9H6B1 395 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 SERHLQ9NQF3 203 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 DUSP22Q9NRW4 184 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 TUBA8Q9NY65 449 aaPredicted RBP11.31□□□□□ -0.6
USP1-203ENST00000442679 KLHL14Q9P2G3 628 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
USP1-203ENST00000442679 PRAMEF25A6NGN4 478 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 NPIPA5E9PKD4 350 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 NR5A2O00482 541 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 TFECO14948 347 aaPredicted RBP11.3□□□□□ -0.6
USP1-203ENST00000442679 HS6ST1O60243 411 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 ICOSLGO75144 302 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 WISP2O76076 250 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 KCNK2O95069 426 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SNX4O95219 450 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 CBX6O95503 412 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 IGKV1D-16P01601 117 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 CYP4B1P13584 511 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 EDN3P14138 238 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 LSP1P33241 339 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 TRPC1P48995 793 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 MAN2A2P49641 1150 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 SEC24CP53992 1094 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 CASP9P55211 416 aa11.3□□□□□ -0.6
USP1-203ENST00000442679 RPS26P62854 115 aaKnown RBP11.3□□□□□ -0.6
USP1-203ENST00000442679 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms