RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DNASE1P24855 282 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CRYBB2P43320 205 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 GZMMP51124 257 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 AKR1C2P52895 323 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CLDN2P57739 230 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 TSPAN5P62079 268 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 RAE1P78406 368 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 AKR1C1Q04828 323 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CAMK1Q14012 370 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 SYPL1Q16563 259 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 NTRK2Q16620 822 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ESCO2Q56NI9 601 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 HENMT1Q5T8I9 393 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 NXPE4Q6UWF7 544 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 HDDC3Q8N4P3 179 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF655Q8N720 491 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 AMER3Q8N944 861 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR8K5Q8NH50 307 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF671Q8TAW3 534 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 WDR20Q8TBZ3 569 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ECHDC3Q96DC8 303 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 TMEM19Q96HH6 336 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 DMRT3Q9NQL9 472 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 NLGN3Q9NZ94 848 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 TRBV5-3A0A0A0MS03 114 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 A0A1W2PRG6 482 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ANHXE9PGG2 379 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 MID1O15344 667 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 PI15O43692 258 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 GCM2O75603 506 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLCO2B1O94956 709 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 LATS1O95835 1130 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 LALBAP00709 142 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CXCL10P02778 98 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ADRB3P13945 408 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 NCBP2P52298 156 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 HORMAD2Q8N7B1 307 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CYB561A3Q8NBI2 242 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 BBS1Q8NFJ9 593 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CREB3L4Q8TEY5 395 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 UBTD2Q8WUN7 234 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CRELD1Q96HD1 420 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR10A4Q9H209 315 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 CXorf36Q9H7Y0 433 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 TEX10Q9NXF1 929 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 STOML2Q9UJZ1 356 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 INSL6Q9Y581 213 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 IRAK3Q9Y616 596 aa9.36□□□□□ -0.91
CDC42SE1-202ENST00000439374 HEPACAM2A8MVW5 462 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MRPS14O60783 128 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ALDOBP05062 364 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 KELP23276 732 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ACVR2AP27037 513 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 CLDN12P56749 244 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SP140Q13342 867 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 GALEQ14376 348 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ZNF234Q14588 700 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC6A19Q695T7 634 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 VITQ6UXI7 678 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 C6orf120Q7Z4R8 191 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 KCT2Q8NC54 265 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR11H4Q8NGC9 324 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 RASSF5Q8WWW0 418 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 UFD1Q92890 307 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SECISBP2Q96T21 854 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 AIF1LQ9BQI0 150 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 ORAI3Q9BRQ5 295 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 EFCAB11Q9BUY7 163 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 NFKBIL1Q9UBC1 381 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 TBX21Q9UL17 535 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MEIS3P1A6NDR6 274 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR5F1O95221 314 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OLFM2O95897 454 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 H1F0P07305 194 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MAGEA2P43356 314 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 BLVRAP53004 296 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 TEAD4Q15561 434 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OTPQ5XKR4 325 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 SLC25A25Q6KCM7 469 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 TMEFF1Q8IYR6 380 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 PGBD3Q8N328 593 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 FRMD1Q8N878 549 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 OR4E2Q8NGC2 313 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 PPP1R16AQ96I34 528 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 FAM46AQ96IP4 442 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 RNF170Q96K19 258 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 PLA2G12AQ9BZM1 189 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 RETREG1Q9H6L5 497 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 METTL17Q9H7H0 456 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 DPP7Q9UHL4 492 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 MYO15AQ9UKN7 3530 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 CABIN1Q9Y6J0 2220 aa9.35□□□□□ -0.91
CDC42SE1-202ENST00000439374 TEX13CA0A0J9YWL9 993 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms