RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PITHD1Q9GZP4 211 aaPredicted RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 METTL8Q9H825 291 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 KLHL21Q9UJP4 597 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 PCTPQ9UKL6 214 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 NUP50Q9UKX7 468 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 DPPA5A6NC42 116 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 F5H5K5 113 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 NPPAP01160 153 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 RLN2P04090 185 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ETFAP13804 333 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 CNR2P34972 360 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 GCGRP47871 477 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 RAB38P57729 211 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 TCEAL1Q15170 157 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF789Q5FWF6 425 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 RPS26P11Q5JNZ5 115 aaPredicted RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF782Q6ZMW2 699 aaPredicted RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF595Q8IYB9 648 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SYT14Q8NB59 555 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 CDS1Q92903 461 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ASB9Q96DX5 294 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 PIP5K1AQ99755 562 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 UBAP1Q9NZ09 502 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 NUFIP1Q9UHK0 495 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 TEX13DA0A0J9YY54 714 aaPredicted RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 ANKRD30BLA7E2S9 258 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 TEX46H3BTG2 121 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ACTL6BO94805 426 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SEMA3DO95025 777 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 MAN2A2P49641 1150 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 DAP3P51398 398 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 KIAA1024LP59773 190 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ERVPABLB-1P60509 514 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 KCNAB1Q14722 419 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SHQ1Q6PI26 577 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 SIRT6Q8N6T7 355 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SLC41A3Q96GZ6 507 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 CALHM2Q9HA72 323 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 RAB26Q9ULW5 256 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 TOR1BO14657 336 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 FLRT2O43155 660 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 BCL2L15Q5TBC7 163 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 UTS2BQ765I0 119 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 DTWD2Q8NBA8 298 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 WFDC5Q8TCV5 224 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 OR1E3Q8WZA6 343 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SCGB3A2Q96PL1 93 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 OBP2BQ9NPH6 170 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 H0YJX3 145 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 E2F3O00716 465 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 MMP12P39900 470 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 CDKL1Q00532 357 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 RBM39Q14498 530 aaKnown RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 GLT8D1Q68CQ7 371 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 SLC22A16Q86VW1 577 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 KCTD7Q96MP8 289 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 EBF2Q9HAK2 575 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ADAMTS6Q9UKP5 1117 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 FARSAQ9Y285 508 aaKnown RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 CHP2O43745 196 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 OR7A10O76100 309 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 PNMTP11086 282 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 HTR3AP46098 478 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 HSD17B7P56937 341 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 PRDX1Q06830 199 aaKnown RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 PTPRRQ15256 657 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 FCRLBQ6BAA4 426 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 PHTF2Q8N3S3 785 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 GPR150Q8NGU9 434 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 SLC37A2Q8TED4 501 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 OAZ3Q9UMX2 235 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 TMEM14AQ9Y6G1 99 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 A0A1B0GX78 115 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 B4GAT1O43505 415 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 UGDHO60701 494 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 ATP4BP51164 291 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 CCR5P51681 352 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 CLDN8P56748 225 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 DCAF7P61962 342 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 CLCA4Q14CN2 919 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 VMACQ2NL98 169 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 NANOGP8Q6NSW7 305 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 SLC27A4Q6P1M0 643 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ARHGAP11AQ6P4F7 1023 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 MMP21Q8N119 569 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ZNF687Q8N1G0 1237 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 FRMD1Q8N878 549 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 HCAR1Q9BXC0 346 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 NANOGQ9H9S0 305 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 ZNF223Q9UK11 482 aaPredicted RBP11.41□□□□□ -0.58
NEK1-201ENST00000439128 ANTXRLA6NF34 631 aa11.41□□□□□ -0.58
NEK1-201ENST00000439128 PDLIM1O00151 329 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms