RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 RNF130Q86XS8 419 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 BANPQ8N9N5 519 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TBC1D31Q96DN5 1066 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 C16orf58Q96GQ5 468 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NAF1Q96HR8 494 aaKnown RBP4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ST6GALNAC5Q9BVH7 336 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CCSER1Q9C0I3 900 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NT5DC2Q9H857 520 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 MBD2Q9UBB5 411 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PURGQ9UJV8 347 aaKnown RBP4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 EMCNQ9ULC0 261 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ITSN1Q15811 1721 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TRPM3Q9HCF6 1732 aaPredicted RBP4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AKAP11Q9UKA4 1901 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PRUNE2Q8WUY3 3088 aa4.23□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CRB1P82279 1406 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 EEA1Q15075 1411 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CASKIN1Q8WXD9 1431 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TRPM7Q96QT4 1865 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CLTCL1P53675 1640 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RNF222A6NCQ9 220 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 FBLL1A6NHQ2 334 aaKnown RBP4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ASB14A6NK59 587 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TMCO5BA8MYB1 307 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NEDD8-MDP1E9PL57 170 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PDLIM1O00151 329 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PDXKO00764 312 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PROS1P07225 676 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 HCKP08631 526 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 GHRP10912 638 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 EZRP15311 586 aaKnown RBP4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 LMO2P25791 158 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 HMGB2P26583 209 aaKnown RBP4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PRDX6P30041 224 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PRDX2P32119 198 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ACAA2P42765 397 aaKnown RBP4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 VEGFCP49767 419 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SGSHP51688 502 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 SLC26A5P58743 744 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 HERVK_113P63132 956 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ERVK-8P63133 956 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 VWA2Q5GFL6 755 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AGAP7PQ5VUJ5 663 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ARSKQ6UWY0 536 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 DEFB123Q8N688 67 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 AGAP3Q96P47 875 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 TNFRSF13CQ96RJ3 184 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ERVK-6Q9BXR3 956 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 EGLN1Q9GZT9 426 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 PANK3Q9H999 370 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NUDT4Q9NZJ9 180 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 ATXN10Q9UBB4 475 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 CLIP2Q9UDT6 1046 aa4.22□□□□□ -1.73
PTP4A1P3-201ENST00000433661 KDM6AO15550 1401 aaPredicted RBP4.21□□□□□ -1.73
PTP4A1P3-201ENST00000433661 NAIPQ13075 1403 aa4.21□□□□□ -1.73
PTP4A1P3-201ENST00000433661 RGSL1A5PLK6 1076 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 CYB561D2O14569 222 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 CD1DP15813 335 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 RIDAP52758 137 aaKnown RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 ERVK11-1P61568 191 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 OTUD3Q5T2D3 398 aaPredicted RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 TMEM26Q6ZUK4 368 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 KRTAP7-1Q8IUC3 87 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 CSNK1G2-AS1Q8NCQ2 148 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 OR52B4Q8NGK2 314 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 RSPH1Q8WYR4 309 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 PINX1Q96BK5 328 aaKnown RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 WBP1Q96G27 269 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 C16orf45Q96MC5 204 aaPredicted RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 ANKRD27Q96NW4 1050 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 DEFB118Q96PH6 123 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 TSGA13Q96PP4 275 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 HSD17B14Q9BPX1 270 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 FICDQ9BVA6 458 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 RBM24Q9BX46 236 aaKnown RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 GPR174Q9BXC1 333 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 NLNQ9BYT8 704 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 GTSE1Q9NYZ3 720 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 USP54Q70EL1 1684 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 EPG5Q9HCE0 2579 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 DICER1Q9UPY3 1922 aaKnown RBP4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 LY75O60449 1722 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 SNED1Q8TER0 1413 aa4.21□□□□□ -1.74
PTP4A1P3-201ENST00000433661 PAPPA2Q9BXP8 1791 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 LMO7Q8WWI1 1683 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 TRGV8A0A0C4DH27 118 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 A0A1B0GWJ7 208 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 FAM230AA0A1W2PPH8 454 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 H3BTX0 84 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 CHADO15335 359 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 ZNF749O43361 778 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 APBB3O95704 486 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 KRT8P05787 483 aa4.2□□□□□ -1.74
PTP4A1P3-201ENST00000433661 DESP17661 470 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms