RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RDH11Q8TC12 318 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 METTL6Q8TCB7 284 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 IFT81Q8WYA0 676 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 EXOSC8Q96B26 276 aaKnown RBP13.51□□□□□ -0.25
MSH5-208ENST00000429846 INTS12Q96CB8 462 aaKnown RBP13.51□□□□□ -0.25
MSH5-208ENST00000429846 TMEM237Q96Q45 408 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 ADOQ96SZ5 270 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 FBXL2Q9UKC9 423 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 NAV3Q8IVL0 2385 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 SH3D21A4FU49 640 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 PLOD2O00469 737 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 COQ9O75208 318 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 URI1O94763 535 aaPredicted RBP13.5□□□□□ -0.25
MSH5-208ENST00000429846 HRGP04196 525 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 ABHD2P08910 425 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 IMPDH1P20839 514 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 ATP5F1P24539 256 aaPredicted RBP13.5□□□□□ -0.25
MSH5-208ENST00000429846 GRK2P25098 689 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 DPP4P27487 766 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 MPIP34949 423 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 PKNOX1P55347 436 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 CORO7P57737 925 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 RAE1P78406 368 aaKnown RBP13.5□□□□□ -0.25
MSH5-208ENST00000429846 LCP2Q13094 533 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 UNC50Q53HI1 259 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 NPSR1Q6W5P4 371 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 GCNT2Q8N0V5 402 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 KAT2AQ92830 837 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 C11orf24Q96F05 449 aaPredicted RBP13.5□□□□□ -0.25
MSH5-208ENST00000429846 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 SLC35C2Q9NQQ7 365 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 SIRT5Q9NXA8 310 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 NDRG3Q9UGV2 375 aa13.5□□□□□ -0.25
MSH5-208ENST00000429846 SERTM1A2A2V5 107 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 A8MXE2 369 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 MSTNO14793 375 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 DLX3O60479 287 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 EVI2BP34910 448 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 DSCR4P56555 118 aaPredicted RBP13.49□□□□□ -0.25
MSH5-208ENST00000429846 ZNF763Q0D2J5 394 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 GANABQ14697 944 aaKnown RBP13.49□□□□□ -0.25
MSH5-208ENST00000429846 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 C16orf78Q8WTQ4 265 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 L3HYPDHQ96EM0 354 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 C16orf45Q96MC5 204 aaPredicted RBP13.49□□□□□ -0.25
MSH5-208ENST00000429846 NEUROD4Q9HD90 331 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 BEX4Q9NWD9 120 aaPredicted RBP13.49□□□□□ -0.25
MSH5-208ENST00000429846 TMEM216Q9P0N5 145 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 ABCG2Q9UNQ0 655 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 RPH3AQ9Y2J0 694 aaPredicted RBP13.49□□□□□ -0.25
MSH5-208ENST00000429846 OR10H1Q9Y4A9 318 aa13.49□□□□□ -0.25
MSH5-208ENST00000429846 A0A087WV62 115 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 A0A1W2PNV4 684 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 LINC01387J3KSC0 135 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 CASKO14936 926 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 ZIC3O60481 467 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 TNFSF13O75888 250 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 PEPDP12955 493 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 CHN1P15882 459 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 HOXB4P17483 251 aaPredicted RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 DDCP20711 480 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 STARP49675 285 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 HTR6P50406 440 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 PRKAA2P54646 552 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 GAS1P54826 345 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 NAA20P61599 178 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 PSG6Q00889 435 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 P4HA3Q7Z4N8 544 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 BIVMQ86UB2 503 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 SLC44A2Q8IWA5 706 aaPredicted RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 NOA1Q8NC60 698 aaKnown RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 OR7G2Q8NG99 324 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 ACMSDQ8TDX5 336 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 EFHD2Q96C19 240 aaPredicted RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 APIPQ96GX9 242 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 SDHAF3Q9NRP4 125 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 PPP4R1LQ9P1A2 415 aa13.48□□□□□ -0.25
MSH5-208ENST00000429846 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
MSH5-208ENST00000429846 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
MSH5-208ENST00000429846 H3BQF6 201 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 GSTA1P08263 222 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
MSH5-208ENST00000429846 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 CD53P19397 219 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 HOXC12P31275 282 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 CPOXP36551 454 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 EEFSECP57772 596 aaKnown RBP13.47□□□□□ -0.25
MSH5-208ENST00000429846 CYP27C1Q4G0S4 372 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 FAM219BQ5XKK7 198 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 OR5M10Q6IEU7 315 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms