RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MZB1Q8WU39 189 aa15.51■□□□□ 0.07
TRIM39-209ENST00000428728 NINJ1Q92982 152 aa15.51■□□□□ 0.07
TRIM39-209ENST00000428728 C11orf24Q96F05 449 aaPredicted RBP15.51■□□□□ 0.07
TRIM39-209ENST00000428728 MIEF1Q9NQG6 463 aa15.51■□□□□ 0.07
TRIM39-209ENST00000428728 TAS2R9Q9NYW1 312 aa15.51■□□□□ 0.07
TRIM39-209ENST00000428728 RPH3AQ9Y2J0 694 aaPredicted RBP15.51■□□□□ 0.07
TRIM39-209ENST00000428728 POLR3HQ9Y535 204 aaPredicted RBP15.51■□□□□ 0.07
TRIM39-209ENST00000428728 A0A1W2PPM1 405 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 FAM221AA4D161 298 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-209ENST00000428728 DIAPH2O60879 1101 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 GLRA3O75311 464 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 CRCPO75575 148 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 IL18BPO95998 194 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 DDCP20711 480 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 MPIP34949 423 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 MC3RP41968 323 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 CPA2P48052 419 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 NCBP2P52298 156 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRIM39-209ENST00000428728 GFRA1P56159 465 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 PRSS53Q2L4Q9 553 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 GALNT18Q6P9A2 607 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 TMEM107Q6UX40 140 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 ZYG11AQ6WRX3 759 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 LUZP2Q86TE4 346 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 OR4K17Q8NGC6 315 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 INTS12Q96CB8 462 aaKnown RBP15.5■□□□□ 0.07
TRIM39-209ENST00000428728 DTNBP1Q96EV8 351 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 TM9SF2Q99805 663 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 G6PC3Q9BUM1 346 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 TXLNGYQ9BZA5 131 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 PPP4R1LQ9P1A2 415 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 CLCF1Q9UBD9 225 aa15.5■□□□□ 0.07
TRIM39-209ENST00000428728 B4DXG7 233 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 G3V2L1 256 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 PLOD2O00469 737 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 PLOD3O60568 738 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 COQ9O75208 318 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 DNASE1P24855 282 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 DPP4P27487 766 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 NTSP30990 170 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 EVI2BP34910 448 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 GSTM5P46439 218 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 LHX2P50458 406 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 PNLIPRP2P54317 469 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 SORDQ00796 357 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 STX5Q13190 355 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 AAGABQ6PD74 315 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 GRAMD2AQ8IUY3 354 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 CCDC126Q96EE4 140 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 FOXC2Q99958 501 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 SFXN3Q9BWM7 321 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 RBM24Q9BX46 236 aaKnown RBP15.49■□□□□ 0.07
TRIM39-209ENST00000428728 SHCBP1LQ9BZQ2 653 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 STMN4Q9H169 189 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-209ENST00000428728 GALNT8Q9NY28 637 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 JKAMPQ9P055 326 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 DCDC2Q9UHG0 476 aa15.49■□□□□ 0.07
TRIM39-209ENST00000428728 ABCA4P78363 2273 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 SERTM1A2A2V5 107 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 SMIM23A6NLE4 172 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 MYO1GB0I1T2 1018 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 PROCP04070 461 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 EPXP11678 715 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 RFX3P48380 749 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 GAS1P54826 345 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 CLDN18P56856 261 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 MRPS22P82650 360 aaKnown RBP15.48■□□□□ 0.07
TRIM39-209ENST00000428728 PSG6Q00889 435 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 FAM71E1Q6IPT2 247 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 FRMD7Q6ZUT3 714 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 ADGRE4PQ86SQ3 457 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 UBQLNLQ8IYU4 475 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 ZFP3Q96NJ6 502 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 CXXC4Q9H2H0 198 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 TNFRSF12AQ9NP84 129 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 MYNNQ9NPC7 610 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 DDX18Q9NVP1 670 aaKnown RBP15.48■□□□□ 0.07
TRIM39-209ENST00000428728 SIRT5Q9NXA8 310 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 FLRT3Q9NZU0 649 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 ITPR3Q14573 2671 aa15.48■□□□□ 0.07
TRIM39-209ENST00000428728 RCBTB2O95199 551 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 ZNF708P17019 499 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 CPOXP36551 454 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 PSPHP78330 225 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 DAZAP2Q15038 168 aaPredicted RBP15.47■□□□□ 0.07
TRIM39-209ENST00000428728 POU4F3Q15319 338 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 CFAP157Q5JU67 520 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 PAMR1Q6UXH9 720 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 P4HA3Q7Z4N8 544 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 CCDC63Q8NA47 563 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 CHDHQ8NE62 594 aaPredicted RBP15.47■□□□□ 0.07
TRIM39-209ENST00000428728 RNF138Q8WVD3 245 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 WNT2BQ93097 391 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 YIPF4Q9BSR8 244 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 C12orf65Q9H3J6 166 aaKnown RBP15.47■□□□□ 0.07
TRIM39-209ENST00000428728 ACBD3Q9H3P7 528 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 DSN1Q9H410 356 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 GLIPR2Q9H4G4 154 aa15.47■□□□□ 0.07
TRIM39-209ENST00000428728 PTGDR2Q9Y5Y4 395 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms