RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 WRBO00258 174 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 LGALS2P05162 132 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 HSD3B1P14060 373 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 IFNGR1P15260 489 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 CELP19835 753 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 HSD17B2P37059 387 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 CD79BP40259 229 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 SLC1A3P43003 542 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 ASMTP46597 345 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 LIM2P55344 173 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 MFSD14CQ5VZR4 134 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 FRG2Q64ET8 278 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 BAIAP2L2Q6UXY1 529 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 CD300LDQ6UXZ3 194 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 B3GLCTQ6Y288 498 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 OR6V1Q8N148 313 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 SVBPQ8N300 66 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 IQCF1Q8N6M8 205 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 FRG2BQ96QU4 278 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 MGME1Q9BQP7 344 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 CIPCQ9C0C6 399 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 ARL6Q9H0F7 186 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 BEX1Q9HBH7 125 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 CHURC1-FNTBB4DL54 471 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 RNASET2O00584 256 aaKnown RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 MID1O15344 667 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 RAD1O60671 282 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 HTR3BO95264 441 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ANXA5P08758 320 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 MTNR1AP48039 350 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 PSMD4P55036 377 aaKnown RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 DGCR2P98153 550 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 CACNG1Q06432 222 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 LGALS3BPQ08380 585 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ZNF155Q12901 538 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ARHGEF7Q14155 803 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 NDUFA9Q16795 377 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 PAN3Q58A45 887 aaKnown RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ELFN2Q5R3F8 820 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 IL20RBQ6UXL0 311 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 CERS6Q6ZMG9 384 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 SLC44A3Q8N4M1 653 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 FBXO15Q8NCQ5 510 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 OR11G2Q8NGC1 345 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 HAVCR2Q8TDQ0 301 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 APOBEC4Q8WW27 367 aaKnown RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 RGMAQ96B86 450 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 CINPQ9BW66 212 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ADGRE3Q9BY15 652 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 C1GALT1Q9NS00 363 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ACSL6Q9UKU0 697 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 SERPINA3P01011 423 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 WNT1P04628 370 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 URODP06132 367 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ANKRD34CP0C6C1 535 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 OR12D1P0DN82 309 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 SPI1P17947 270 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 YBEYP58557 167 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 GINS1Q14691 196 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 AVPI1Q5T686 147 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 OR5M10Q6IEU7 315 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 ANGPTL8Q6UXH0 198 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 GLDNQ6ZMI3 551 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-206ENST00000428313 KLHL36Q8N4N3 616 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 OR6K3Q8NGY3 331 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 PKP4Q99569 1192 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 NTMQ9P121 344 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 RASD1Q9Y272 281 aa15.15■□□□□ 0.02
C9orf3-206ENST00000428313 CTDSPLO15194 276 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CDC123O75794 336 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ARAFP10398 606 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 SPP1P10451 314 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 DRD5P21918 477 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 MST1P26927 711 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 VIPR1P32241 457 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 VEGFCP49767 419 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 PSMA6P60900 246 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 KIAA1161Q6NSJ0 714 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 TRIM40Q6P9F5 258 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 LDLRAD3Q86YD5 345 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 GPC2Q8N158 579 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ARMC10Q8N2F6 343 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CELF5Q8N6W0 485 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 PDFQ9HBH1 243 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 BARX1Q9HBU1 254 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CA10Q9NS85 328 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 TAS2R3Q9NYW6 316 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 FBXL3Q9UKT7 428 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 MKL2Q9ULH7 1088 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF106Q9H2Y7 1883 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 A0A1W2PRB8 838 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 NAP1L6A6NFF2 107 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 SIGLEC5O15389 551 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ARPC5O15511 151 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 H1F0P07305 194 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ALPIP09923 528 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms