RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 A0A0D9SG52 128 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 A8MV72 311 aaPredicted RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 NFKBIEO00221 500 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 MAP2K4P45985 399 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 RFPL4BQ6ZWI9 263 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OTOP2Q7RTS6 562 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 NINQ8N4C6 2090 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 TCTE1Q5JU00 501 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 UBE2NLQ5JXB2 153 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 CREB3L2Q70SY1 520 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 STEAP2Q8NFT2 490 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR51T1Q8NGJ9 327 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR9I1Q8NGQ6 314 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 HAS2Q92819 552 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 REV1Q9UBZ9 1251 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 PCDHGA6Q9Y5G7 932 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 TEX51A0A1B0GUA7 166 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR6C74A6NCV1 312 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 KRBOX1C9JBD0 128 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 C17orf112F2Z3M2 114 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GGT1P19440 569 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ELP4Q96EB1 424 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 TSSK2Q96PF2 358 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 A0A1W2PQL4 384 aaPredicted RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OSMP13725 252 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GNB3P16520 340 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 NFATC3Q12968 1075 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR5D14Q8NGL3 314 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SCAMP5Q8TAC9 235 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GPR148Q8TDV2 347 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SORCS1Q8WY21 1168 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 MS4A4EQ96PG1 132 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 HERPUD2Q9BSE4 406 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 DIRAS1O95057 198 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 SERPINA7P05543 415 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 DCNP07585 359 aaKnown RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 TYRP14679 529 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 HNRNPKP61978 463 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 SLC2A12Q8TD20 617 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 SH3YL1Q96HL8 342 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 NICN1Q9BSH3 213 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 ARPC5O15511 151 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 GDI1P31150 447 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 NAA10P41227 235 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 OR1E2P47887 323 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 APOFQ13790 326 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 PRRT3Q5FWE3 981 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 MYADMQ96S97 322 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 APOBEC3GQ9HC16 384 aaKnown RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 SIX2Q9NPC8 291 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 IGLV3-22A0A075B6J6 115 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 DCAF12L1Q5VU92 463 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 Q6ZVU0 165 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 A0A1W2PRU2 124 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 BTBD17A6NE02 478 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 FOXO6A8MYZ6 492 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 SERTAD2Q14140 314 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 LRRC28Q86X40 367 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 CNOT4O95628 575 aaKnown RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 MAS1P04201 325 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 DLX5P56178 289 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 LSAMPQ13449 338 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 A0A0G2JLL6 359 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 A8MVM7 634 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 GAPDHSO14556 408 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 VNN1O95497 513 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 P04436 131 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 RAB40BQ12829 278 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 TECRLQ5HYJ1 363 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 METAP1DQ6UB28 335 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 PRRT2Q7Z6L0 340 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-203ENST00000427191 NT5C3BQ969T7 300 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 CDH20Q9HBT6 801 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 HRASLS2Q9NWW9 162 aa13.73□□□□□ -0.21
PTPN13-203ENST00000427191 CD300LBA8K4G0 201 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SOCS2O14508 198 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RAB8AP61006 207 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RAP2BP61225 183 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SULF2Q8IWU5 870 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF610Q8N9Z0 462 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR51J1Q9H342 316 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 BCAS3Q9H6U6 928 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR1A2Q9Y585 309 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 FANCGO15287 622 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SRPX2O60687 465 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SMPD1P17405 629 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms