RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DUSP11O75319 330 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 B3GALNT1O75752 331 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 FLOT1O75955 427 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 OR6A2O95222 327 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 OXSR1O95747 527 aaPredicted RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 KRT14P02533 472 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 FYNP06241 537 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 RHOXF2BP0C7M4 288 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 NQO1P15559 274 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CCNCP24863 283 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ACKR3P25106 362 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SRD5A2P31213 254 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 MDH1P40925 334 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 TUFMP49411 452 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SERPINB8P50452 374 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 B2MP61769 119 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 GNG11P61952 73 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 IFI35P80217 286 aaPredicted RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 HSPA14Q0VDF9 509 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CETN1Q12798 172 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 GPR50Q13585 617 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SPCS2Q15005 226 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CAMK4Q16566 473 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 IMMTQ16891 758 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ANKDD1AQ495B1 522 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CCDC122Q5T0U0 273 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SCARA5Q6ZMJ2 495 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 RNF10Q8N5U6 811 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 IFT81Q8WYA0 676 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SGF29Q96ES7 293 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CCDC42Q96M95 316 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ZMAT2Q96NC0 199 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CATSPER2Q96P56 530 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 NAP1L4Q99733 375 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SLF1Q9BQI6 1058 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 RHOXF2Q9BQY4 288 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SIKE1Q9BRV8 207 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ERP44Q9BS26 406 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SLC25A39Q9BZJ4 359 aaPredicted RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 XPO4Q9C0E2 1151 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 DRC3Q9H069 523 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 PSTPIP2Q9H939 334 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 PATZ1Q9HBE1 687 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 TIGARQ9NQ88 270 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SAMSN1Q9NSI8 373 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ETNK2Q9NVF9 386 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 FKBP14Q9NWM8 211 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 PCSK1NQ9UHG2 260 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CFAP45Q9UL16 551 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 TMCC3Q9ULS5 477 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 SNX7Q9UNH6 387 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CHMP2BQ9UQN3 213 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CA5BQ9Y2D0 317 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 IKBKGQ9Y6K9 419 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 COMMD3-BMI1R4GMX3 469 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 JCADQ9P266 1359 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 EIF2AK4Q9P2K8 1649 aaKnown RBP2.71□□□□□ -1.98
LINC01040-201ENST00000425048 ADGRL1O94910 1474 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 CFTRP13569 1480 aa2.71□□□□□ -1.98
LINC01040-201ENST00000425048 GLI2P10070 1586 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 DIP2AQ14689 1571 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 PTCH1Q13635 1447 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 C9orf84Q5VXU9 1444 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 A0A1B0GUL6 1792 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 PPLO60437 1756 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 LRRC7Q96NW7 1537 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 IGHV3OR16-12A0A075B7B8 117 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 CTAGE15A4D2H0 777 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 VPS37CA5D8V6 355 aaPredicted RBP2.7□□□□□ -1.98
LINC01040-201ENST00000425048 SIGLEC16A6NMB1 481 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 A8MUI8 341 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 KMOO15229 486 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 MAGEB3O15480 346 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF254O75437 659 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 WISP3O95389 354 aaPredicted RBP2.7□□□□□ -1.98
LINC01040-201ENST00000425048 LDHCP07864 332 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 PAEPP09466 180 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 LAMP1P11279 417 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 CPA3P15088 417 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 ACADVLP49748 655 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 NCALDP61601 193 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 RELAQ04206 551 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 CD47Q08722 323 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 DPYSQ14117 519 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 COG2Q14746 738 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 SLC17A1Q14916 467 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 EMC2Q15006 297 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 PPP1R7Q15435 360 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 NDUFA5Q16718 116 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 LBHQ53QV2 105 aaPredicted RBP2.7□□□□□ -1.98
LINC01040-201ENST00000425048 SPOUT1Q5T280 376 aaKnown RBP2.7□□□□□ -1.98
LINC01040-201ENST00000425048 ERMARDQ5T6L9 678 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 METTL21CQ5VZV1 264 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF776Q68DI1 518 aaPredicted RBP2.7□□□□□ -1.98
LINC01040-201ENST00000425048 FAM173BQ6P4H8 233 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 KRT77Q7Z794 578 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 CTAGE6Q86UF2 777 aa2.7□□□□□ -1.98
LINC01040-201ENST00000425048 CD302Q8IX05 232 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms