RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 LCATP04180 440 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 KLK3P07288 261 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ABHD2P08910 425 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PLA2G2AP14555 144 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PVRP15151 417 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SAT1P21673 171 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TNFRSF8P28908 595 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PEBP1P30086 187 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MSH2P43246 934 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ENTPD1P49961 510 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SELENOVP59797 346 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 RAB10P61026 200 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 DCAF7P61962 342 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 NAE1Q13564 534 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 HNF4GQ14541 408 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TWIST1Q15672 202 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ZKSCAN8Q15776 578 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TSTQ16762 297 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TCTE1Q5JU00 501 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TEX35Q5T0J7 233 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CAPN13Q6MZZ7 669 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 AGTRAPQ6RW13 159 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 LCTLQ6UWM7 567 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TMEM207Q6UWW9 146 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CDHR3Q6ZTQ4 885 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TAOK1Q7L7X3 1001 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ADAMTSL2Q86TH1 951 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CEP97Q8IW35 865 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 GHDCQ8N2G8 530 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 C2orf73Q8N5S3 287 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 OR2L3Q8NG85 312 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 OR1L3Q8NH93 324 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SNRNP27Q8WVK2 155 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 N4BP2L2Q92802 583 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 KIAA1143Q96AT1 154 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 FBXL8Q96CD0 374 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CCNL2Q96S94 520 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CTRCQ99895 268 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CCDC77Q9BR77 488 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 HAUS8Q9BT25 410 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 DPH7Q9BTV6 452 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 DERL2Q9GZP9 239 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CDC42EP4Q9H3Q1 356 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 NMRAL1Q9HBL8 299 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 APMAPQ9HDC9 416 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 FAM60AQ9NP50 221 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MRPS30Q9NP92 439 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 KRCC1Q9NPI7 259 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 EURLQ9NYK6 297 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 STOX2Q9P2F5 926 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 AASSQ9UDR5 926 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PILRAQ9UKJ1 303 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PADI1Q9ULC6 663 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 RUVBL2Q9Y230 463 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ACOT9Q9Y305 439 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 IKBKGQ9Y6K9 419 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 WDFY4Q6ZS81 3184 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MYLKQ15746 1914 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 KCNE1BA0A087WTH5 132 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 A0A1W2PPH5 198 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 OR2A25A4D2G3 310 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 OR6C68A6NDL8 312 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TMEM150CB9EJG8 249 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 INAFM1C9JVW0 142 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 E7EQ34 232 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CDC7O00311 574 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 RGS14O43566 566 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SCRG1O75711 98 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PIAS1O75925 651 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 OR2B3O76000 313 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 KIAA0754O94854 1291 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SLU7O95391 586 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ACSL3O95573 720 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 LCKP06239 509 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 C2P06681 752 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TUBBP07437 444 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 INHBAP08476 426 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ANXA5P08758 320 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CCDC166P0CW27 439 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CD1DP15813 335 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MAGP20916 626 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CHMP24386 653 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 IMPA1P29218 277 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 DEKP35659 375 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CDKN2AP42771 156 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 HNMTP50135 292 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 CCR9P51686 369 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ARSFP54793 590 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 FOXG1P55316 489 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MC1RQ01726 317 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 FASTKQ14296 549 aaKnown RBP2.33□□□□□ -2.04
VPS13A-208ENST00000423463 TGIF1Q15583 401 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 ZIC1Q15915 447 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PHKG1Q16816 387 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 FAM69AQ5T7M9 428 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 DCAF12L2Q5VW00 463 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 PWWP2BQ6NUJ5 590 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 MZT2BQ6NZ67 158 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SLC22A25Q6T423 547 aa2.33□□□□□ -2.04
VPS13A-208ENST00000423463 SUSD1Q6UWL2 747 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms