RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 APOC2P02655 101 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 RPN2P04844 631 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 HOXD4P09016 255 aaPredicted RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR56A5P0C7T3 313 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ERGP11308 486 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 FBLP22087 321 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 CXCR2P25025 360 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 PSMB4P28070 264 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 IST1P53990 364 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 HADHBP55084 474 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ACVR1Q04771 509 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 EEF1A2Q05639 463 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ACER2Q5QJU3 275 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ANKRD20A2Q5SQ80 823 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 TSTD2Q5T7W7 516 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ANKRD20A1Q5TYW2 823 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ANKRD20A3Q5VUR7 823 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 GARNL3Q5VVW2 1013 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 PRSS58Q8IYP2 241 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 KATNAL2Q8IYT4 538 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 BEST3Q8N1M1 668 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 MARVELD2Q8N4S9 558 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 METTL27Q8N6F8 245 aaPredicted RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 DNAAF1Q8NEP3 725 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR2L3Q8NG85 312 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR4N2Q8NGD1 307 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR2A1Q8NGT9 310 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 LILRB4Q8NHJ6 448 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 WIPF2Q8TF74 440 aaPredicted RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 PGAM5Q96HS1 289 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ZNF354BQ96LW1 612 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 CMTM3Q96MX0 182 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 SPATA13Q96N96 652 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 IL17FQ96PD4 163 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 SIGLEC12Q96PQ1 595 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 OLFM1Q99784 485 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 TBL1YQ9BQ87 522 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 H2AFJQ9BTM1 129 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 CARD6Q9BX69 1037 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 RAB11FIP5Q9BXF6 653 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 NAT10Q9H0A0 1025 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 TRIM45Q9H8W5 580 aaPredicted RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 MKKSQ9NPJ1 570 aaPredicted RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 SMARCAL1Q9NZC9 954 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 SLC17A6Q9P2U8 582 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 TEKT2Q9UIF3 430 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 CDC14AQ9UNH5 594 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 PCDHGB5Q9Y5G0 923 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM169AQ9Y6X4 670 aa4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 INTS1Q8N201 2190 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-202ENST00000422687 ANK3Q12955 4377 aaKnown RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ANK2Q01484 3957 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 IGKV1-8A0A0C4DH67 115 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 A0A0J9YVX5 310 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 A0A1W2PQ09 198 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CCDC162PA2VCL2 907 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM90A8PA6NJQ4 464 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TTC36A6NLP5 189 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 NPIPA5E9PKD4 350 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 H0YGG7 62 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 EBAG9O00559 213 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR1I1O60431 355 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 NADKO95544 446 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 C1orf105O95561 183 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TSPAN12O95859 305 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 PLAUP00749 431 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 HEXBP07686 556 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SP1P08047 785 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM90A13PP0C7W8 464 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM90A24PP0C7X0 464 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 C8orf89P0DMQ9 161 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 KRT4P19013 534 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 KLK2P20151 261 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 EDN2P20800 178 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 MSNP26038 577 aaKnown RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 POU1F1P28069 291 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 PSMB5P28074 263 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TACR3P29371 465 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CHRNB4P30926 498 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CDAP32320 146 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CENPAP49450 140 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FOLH1Q04609 750 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ZNF33BQ06732 778 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 KLF10Q13118 480 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM53BQ14153 422 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 PRPSAP1Q14558 356 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR1C1Q15619 314 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 MEP1AQ16819 746 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CCSMST1Q4G0I0 132 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SYTL3Q4VX76 610 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TMEM268Q5VZI3 342 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ARMC3Q5W041 872 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ZNF425Q6IV72 752 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SLC25A25Q6KCM7 469 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ZNF534Q76KX8 674 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TAS2R42Q7RTR8 314 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms