RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MIEF1Q9NQG6 463 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 PSME2Q9UL46 239 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 EXPH5Q8NEV8 1989 aa16.46■□□□□ 0.22
VCP-202ENST00000417448 A0A1B0GVC2 190 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 ACOT7O00154 380 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 ZFAND5O76080 213 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 GLSO94925 669 aaPredicted RBP16.45■□□□□ 0.22
VCP-202ENST00000417448 IGKV3-11P04433 115 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 CELA3AP09093 270 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 PCSK2P16519 638 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 S1PR1P21453 382 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 EPHA3P29320 983 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 PEX19P40855 299 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 DIO3P55073 304 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 RNF4P78317 190 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 PLGLB1Q02325 96 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 DUSP8Q13202 625 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 PRICKLE4Q2TBC4 344 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 SLC9B1Q4ZJI4 515 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 C1orf185Q5T7R7 199 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 SHEQ5VZ18 495 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 TRILQ7L0X0 811 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 CXorf67Q86X51 503 aaPredicted RBP16.45■□□□□ 0.22
VCP-202ENST00000417448 GALNT12Q8IXK2 581 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 LRRC25Q8N386 305 aaPredicted RBP16.45■□□□□ 0.22
VCP-202ENST00000417448 VWA5B2Q8N398 1253 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 OR7A2PQ8NGA2 310 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 OR9A2Q8NGT5 310 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 CKAP2Q8WWK9 683 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 THOC1Q96FV9 657 aaKnown RBP16.45■□□□□ 0.22
VCP-202ENST00000417448 FBXL20Q96IG2 436 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 BBS4Q96RK4 519 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 CCT7Q99832 543 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 MAT2BQ9NZL9 334 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 SH3BP4Q9P0V3 963 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 KIAA1549Q9HCM3 1950 aa16.45■□□□□ 0.22
VCP-202ENST00000417448 ANK3Q12955 4377 aaKnown RBP16.44■□□□□ 0.22
VCP-202ENST00000417448 A0A1W2PPR1 153 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 G3V3Y1 287 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 H7C1Q1 480 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 KLF11O14901 512 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 WDR1O75083 606 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 OR2J2O76002 312 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 G6PDP11413 515 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 MAGEA5P43359 124 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 NME5P56597 212 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 BIKQ13323 160 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 MPEG1Q2M385 716 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 RIPPLY2Q5TAB7 128 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 TMEM64Q6YI46 380 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 RNF111Q6ZNA4 994 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 SEM1Q6ZVN7 128 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 METTL2AQ96IZ6 378 aaKnown RBP16.44■□□□□ 0.22
VCP-202ENST00000417448 MARK4Q96L34 752 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 GAL3ST4Q96RP7 486 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 PELOQ9BRX2 385 aaKnown RBP16.44■□□□□ 0.22
VCP-202ENST00000417448 REEP4Q9H6H4 257 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 MEAF6Q9HAF1 191 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 B4GALT7Q9UBV7 327 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 COPS7AQ9UBW8 275 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 BCAP29Q9UHQ4 241 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 DTX4Q9Y2E6 619 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 TMED5Q9Y3A6 229 aa16.44■□□□□ 0.22
VCP-202ENST00000417448 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 AQP7O14520 342 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 ZNF195O14628 629 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 HDAC3O15379 428 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 SNUPNO95149 360 aaKnown RBP16.43■□□□□ 0.22
VCP-202ENST00000417448 NCBP2P52298 156 aaKnown RBP eCLIP16.43■□□□□ 0.22
VCP-202ENST00000417448 SLC37A1P57057 533 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 EMX2Q04743 252 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 FBXW10Q5XX13 1052 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.22
VCP-202ENST00000417448 ZNF551Q7Z340 670 aaPredicted RBP16.43■□□□□ 0.22
VCP-202ENST00000417448 SLC22A16Q86VW1 577 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 TMEM251Q8N6I4 163 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 NAXEQ8NCW5 288 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 RNASE6Q93091 150 aaKnown RBP16.43■□□□□ 0.22
VCP-202ENST00000417448 OR10A5Q9H207 317 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 GLIPR2Q9H4G4 154 aa16.43■□□□□ 0.22
VCP-202ENST00000417448 BEX4Q9NWD9 120 aaPredicted RBP16.43■□□□□ 0.22
VCP-202ENST00000417448 SONP18583 2426 aaKnown RBP16.43■□□□□ 0.22
VCP-202ENST00000417448 DYRK3O43781 588 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 CBX7O95931 251 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 ATP1B1P05026 303 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 ALDOCP09972 364 aaKnown RBP16.42■□□□□ 0.22
VCP-202ENST00000417448 ENDOUP21128 410 aaKnown RBP16.42■□□□□ 0.22
VCP-202ENST00000417448 MAPK1P28482 360 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 ASCL1P50553 236 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 SSR4P51571 173 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 FUT7Q11130 342 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 MAP4K2Q12851 820 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.222e-13■■■□□ 16.9
VCP-202ENST00000417448 NNATQ16517 81 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 ZNF628Q5EBL2 1059 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 Q5PR19 223 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 RGS9BPQ6ZS82 235 aa16.42■□□□□ 0.22
VCP-202ENST00000417448 IKBIPQ70UQ0 350 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms