RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 KANSL1Q7Z3B3 1105 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 RNF130Q86XS8 419 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFFL-205ENST00000415395 SAMD14Q8IZD0 417 aaPredicted RBP10.86□□□□□ -0.67
RFFL-205ENST00000415395 CSNK1A1LQ8N752 337 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 AMER3Q8N944 861 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 CIDECQ96AQ7 238 aaPredicted RBP10.86□□□□□ -0.67
RFFL-205ENST00000415395 MACROD1Q9BQ69 325 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 OR2B2Q9GZK3 357 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 HOXD1Q9GZZ0 328 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 LYRM4Q9HD34 91 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 GPR83Q9NYM4 423 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 ZNF226Q9NYT6 803 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 ZNF221Q9UK13 617 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 TMCC3Q9ULS5 477 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 ENPP4Q9Y6X5 453 aa10.86□□□□□ -0.67
RFFL-205ENST00000415395 LOC105369274A0A096LPK9 316 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 LOC102723532A0A0G2JNH3 316 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 DSCR3O14972 297 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 PROM1O43490 865 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 DUX1O43812 170 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 B3GALT2O43825 422 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 PDE9AO76083 593 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 SLITRK5O94991 958 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 ADAP00813 363 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 HSMCR30P0CW71 290 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 AQP1P29972 269 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 NTSP30990 170 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 SLC15A1P46059 708 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 MANFP55145 182 aaKnown RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 SKP1P63208 163 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 CD300CQ08708 224 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 GAB1Q13480 694 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 C1DQ13901 141 aaKnown RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 AGAP6Q5VW22 663 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 RSBN1Q5VWQ0 802 aaPredicted RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 PLAG1Q6DJT9 500 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 CCBE1Q6UXH8 406 aaPredicted RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 PTCHD4Q6ZW05 846 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 CCDC190Q86UF4 302 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 SLC35F3Q8IY50 421 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 OR4N4Q8N0Y3 316 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 PIGKQ92643 395 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 UBE2FQ969M7 185 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 ZNF486Q96H40 463 aaPredicted RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 AHCYL2Q96HN2 611 aaKnown RBP10.85□□□□□ -0.67
RFFL-205ENST00000415395 ZNF285Q96NJ3 590 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 AGAP4Q96P64 663 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 MGLLQ99685 303 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 ENAMQ9NRM1 1142 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 ATG4BQ9Y4P1 393 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 NCOR1O75376 2440 aa10.85□□□□□ -0.67
RFFL-205ENST00000415395 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 A0A1W2PR48 441 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FAM172BPA6NC97 362 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 C5orf58C9J3I9 102 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 RGS13O14921 159 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 KIAA0513O60268 411 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CCNKO75909 580 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 AIFM1O95831 613 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PTHP01270 115 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 STATHP02808 62 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 NUDT7P0C024 238 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 NR2F6P10588 404 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 CSTF2P33240 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
RFFL-205ENST00000415395 XCR1P46094 333 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CRISP1P54107 249 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 TNFRSF17Q02223 184 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MED22Q15528 200 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CEBPEQ15744 281 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PRSS53Q2L4Q9 553 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SLC48A1Q6P1K1 146 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 C19orf48Q6RUI8 117 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PLXDC1Q8IUK5 500 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MCATQ8IVS2 390 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 MMP21Q8N119 569 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 FAM181AQ8N9Y4 354 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 B3GNT7Q8NFL0 401 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 WDR36Q8NI36 951 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 NFKBIDQ8NI38 313 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 RASSF5Q8WWW0 418 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 EXOSC8Q96B26 276 aaKnown RBP10.84□□□□□ -0.67
RFFL-205ENST00000415395 MAP3K3Q99759 626 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 OR51E2Q9H255 320 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 IL21RQ9HBE5 538 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 GIMAP4Q9NUV9 329 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SEMA5BQ9P283 1151 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 CES1P1Q9UKY3 287 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PLCL2Q9UPR0 1127 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 MGAT4BQ9UQ53 548 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 SPACA6W5XKT8 324 aa10.84□□□□□ -0.67
RFFL-205ENST00000415395 PCDH15Q96QU1 1955 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms