RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 A0A1W2PPV9 198 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 FEZF1A0PJY2 475 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 H7BY64 318 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 MAN2B1O00754 1011 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 OR1F1O43749 312 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 UBXN7O94888 489 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 CRYZL1O95825 349 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 HLA-DPB1P04440 258 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 PRKAR1AP10644 381 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 SLC2A2P11168 524 aaPredicted RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 STAT5AP42229 794 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 MAP2K3P46734 347 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 EVX1P49640 407 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 GZMKP49863 264 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 ST3GAL3Q11203 375 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 LRRC32Q14392 662 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 C9orf64Q5T6V5 341 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 NDUFAF5Q5TEU4 345 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 KIAA1161Q6NSJ0 714 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 LRRTM4Q86VH4 590 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 TMEM145Q8NBT3 493 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 OR56A1Q8NGH5 318 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 OR5D16Q8NGK9 328 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 OSTF1Q92882 214 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 PRAP1Q96NZ9 151 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 BBS4Q96RK4 519 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 ARHGDIGQ99819 225 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 RBFOX1Q9NWB1 397 aaKnown RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 MCUBQ9NWR8 336 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 CALML5Q9NZT1 146 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 TBX21Q9UL17 535 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 POLHQ9Y253 713 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 LRIT2A6NDA9 550 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ZSCAN5BA6NJL1 495 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 CASKO14936 926 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SLC19A2O60779 497 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 CHRM4P08173 479 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ADH5P11766 374 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SLC1A3P43003 542 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 AVPR1BP47901 424 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 NCBP2P52298 156 aaKnown RBP eCLIP9.19□□□□□ -0.94
CD44-206ENST00000415148 CTBP2P56545 445 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 MAP4K2Q12851 820 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 HNRNPA1L2Q32P51 320 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TRIQKQ629K1 86 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 PLCZ1Q86YW0 608 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ARIH2OSQ8N7S6 290 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ZNF366Q8N895 744 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TOR1AIP2Q8NFQ8 470 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 OR4M2Q8NGB6 313 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ACOT12Q8WYK0 555 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 MAP6Q96JE9 813 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ATF6BQ99941 703 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 BTBD1Q9H0C5 482 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 EGLN3Q9H6Z9 239 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 NIPAL2Q9H841 368 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 KCNK12Q9HB15 430 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 LIPT1Q9Y234 373 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TCF20Q9UGU0 1960 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 A0A1B0GVC2 190 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 A6NIN4 97 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SGK494L7N484 410 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 HRO43593 1189 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 AKAP8O43823 692 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 SCO1O75880 301 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 BUD31P41223 144 aaPredicted RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 OR3A3P47888 321 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SLC6A11P48066 632 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 METAP1P53582 386 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TAS2R41P59536 307 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 CSNK1G2P78368 415 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 BDH1Q02338 343 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TNK1Q13470 666 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ELAVL3Q14576 367 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 SLC9A5Q14940 896 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SF3A2Q15428 464 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 ZIC1Q15915 447 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 DECR1Q16698 335 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 AADACL4Q5VUY2 407 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TYW3Q6IPR3 259 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 RRM2BQ7LG56 351 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 ELMOD2Q8IZ81 293 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 Q8N402 240 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 KLHL36Q8N4N3 616 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 CXorf40AQ8TE69 158 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SMG7Q92540 1137 aaKnown RBP9.19□□□□□ -0.94
CD44-206ENST00000415148 RAB7BQ96AH8 199 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 KCNJ15Q99712 375 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 TMEM43Q9BTV4 400 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 IL20Q9NYY1 176 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 SLC23A2Q9UGH3 650 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 CLCA2Q9UQC9 943 aa9.19□□□□□ -0.94
CD44-206ENST00000415148 C2orf92A0A1B0GVN3 265 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 GPR89AB7ZAQ6 455 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms