RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 LSM11P83369 360 aaKnown RBP eCLIP16.74■□□□□ 0.271e-7■■■■■ 27.1
CXXC1-202ENST00000412036 MC2RQ01718 297 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 TCTN3Q6NUS6 607 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF605Q86T29 641 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF721Q8TF20 911 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 RMND5BQ96G75 393 aaPredicted RBP16.74■□□□□ 0.27
CXXC1-202ENST00000412036 SPSB2Q99619 263 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 OR8D2Q9GZM6 311 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF350Q9GZX5 532 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 MKKSQ9NPJ1 570 aaPredicted RBP16.74■□□□□ 0.27
CXXC1-202ENST00000412036 CNOT11Q9UKZ1 510 aaKnown RBP16.74■□□□□ 0.27
CXXC1-202ENST00000412036 AP4B1Q9Y6B7 739 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 AHCTF1Q8WYP5 2266 aa16.74■□□□□ 0.27
CXXC1-202ENST00000412036 DPPA5A6NC42 116 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 KCNK2O95069 426 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 ALPLP05186 524 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 RFX3P48380 749 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 NUBP1P53384 320 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 TRA2AQ13595 282 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■□□□□ 10.9
CXXC1-202ENST00000412036 ELOAQ14241 798 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CSRP2Q16527 193 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CLPPQ16740 277 aaPredicted RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 DHRS13Q6UX07 377 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 RBM44Q6ZP01 1051 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 SLC30A8Q8IWU4 369 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 OR6T1Q8NGN1 323 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 BBS10Q8TAM1 723 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 LMF2Q9BU23 707 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 NUDT9Q9BW91 350 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 TGIF2Q9GZN2 237 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 DUSP22Q9NRW4 184 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 THUMPD1Q9NXG2 353 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 TMEFF2Q9UIK5 374 aaPredicted RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 A0A0G2JPF8 293 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 HNRNPCL2B2RXH8 293 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 HNRNPCL3B7ZW38 293 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 G3V2T6 193 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 MITFO75030 526 aaPredicted RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 ALOX5P09917 674 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 LINGO3P0C6S8 592 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 PABPC4LP0CB38 370 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 HNRNPCL4P0DMR1 293 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 TNNI3P19429 210 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 PPP2R2BQ00005 443 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 GPR68Q15743 365 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 SLCO6A1Q86UG4 719 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CYP4Z1Q86W10 505 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CARM1Q86X55 608 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 COX18Q8N8Q8 333 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CHDHQ8NE62 594 aaPredicted RBP16.73■□□□□ 0.27
CXXC1-202ENST00000412036 SLC2A12Q8TD20 617 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 NRSN2Q9GZP1 204 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 CTPS2Q9NRF8 586 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 THSD1Q9NS62 852 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 LYVE1Q9Y5Y7 322 aa16.73■□□□□ 0.27
CXXC1-202ENST00000412036 IDSB3KWA1 339 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 GNGT2O14610 69 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 UQCRBP14927 111 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ETS2P15036 469 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 CCKBRP32239 447 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 POLR2IP36954 125 aaKnown RBP16.72■□□□□ 0.27
CXXC1-202ENST00000412036 MAGEA8P43361 318 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ZIK1Q3SY52 487 aaPredicted RBP16.72■□□□□ 0.27
CXXC1-202ENST00000412036 OR4C15Q8NGM1 316 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 GEMIN6Q8WXD5 167 aaKnown RBP16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF354BQ96LW1 612 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 C9orf16Q9BUW7 83 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 LIN28AQ9H9Z2 209 aaKnown RBP16.72■□□□□ 0.27
CXXC1-202ENST00000412036 FLRT3Q9NZU0 649 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 WDR45Q9Y484 360 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 VSTM2BA6NLU5 285 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 SLITRK5O94991 958 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 IL11RAQ14626 422 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 CDCP2Q5VXM1 449 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 OVCH1Q7RTY7 1134 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 C9orf40Q8IXQ3 194 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 C8orf44Q96CB5 159 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF607Q96SK3 696 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 STACQ99469 402 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ACER3Q9NUN7 267 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF223Q9UK11 482 aaPredicted RBP16.72■□□□□ 0.27
CXXC1-202ENST00000412036 LIPT1Q9Y234 373 aa16.72■□□□□ 0.27
CXXC1-202ENST00000412036 SDK2Q58EX2 2172 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 DUXAA6NLW8 204 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 ONECUT2O95948 504 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 LGI1O95970 557 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 IFI6P09912 130 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 GPR143P51810 404 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 ISXQ2M1V0 245 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 MRPL14Q6P1L8 145 aaKnown RBP16.71■□□□□ 0.27
CXXC1-202ENST00000412036 ZNF836Q6ZNA1 936 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 C16orf47Q6ZP98 133 aaPredicted RBP16.71■□□□□ 0.27
CXXC1-202ENST00000412036 METTL25Q8N6Q8 603 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 LZICQ8WZA0 190 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 WDR77Q9BQA1 342 aaPredicted RBP16.71■□□□□ 0.27
CXXC1-202ENST00000412036 BTBD2Q9BX70 525 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 OSBPL10Q9BXB5 764 aa16.71■□□□□ 0.27
CXXC1-202ENST00000412036 VCX3BQ9H321 246 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms