RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GVQW1Q8N7I0 195 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 ZNF383Q8NA42 475 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 OR5M9Q8NGP3 310 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 OR1F12Q8NHA8 337 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 LILRB4Q8NHJ6 448 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 DDB2Q92466 427 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CAPNS2Q96L46 248 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 CCT8L2Q96SF2 557 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 COPS8Q99627 209 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 MRPL37Q9BZE1 423 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 UBE2TQ9NPD8 197 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 PDP1Q9P0J1 537 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 MBD2Q9UBB5 411 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 PURGQ9UJV8 347 aaKnown RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 PACSIN2Q9UNF0 486 aaPredicted RBP4.3□□□□□ -1.72
LSM5-205ENST00000409952 SPATA31D1Q6ZQQ2 1576 aa4.3□□□□□ -1.72
LSM5-205ENST00000409952 PNPLA6Q8IY17 1366 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 IGLV5-45A0A087WSX0 123 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 A8MU76 341 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ZNF879B4DU55 563 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 NPIPA7E9PJI5 369 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 OR7A17O14581 309 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 TRDMT1O14717 391 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 NMT2O60551 498 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 N4BP1O75113 896 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 LRCH4O75427 683 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 B3GAT3O94766 335 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 STAMBPO95630 424 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 IGF1P05019 195 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 NPIPA8P0DM63 369 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 CASP14P31944 242 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 RDXP35241 583 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 SLC1A4P43007 532 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 MAGEA5P43359 124 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ABCG1P45844 678 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 PGFP49763 221 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 RAB9AP51151 201 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 BDH1Q02338 343 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 CHI3L2Q15782 390 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ALKBH6Q3KRA9 238 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 SPANXN4Q5MJ08 99 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 BHLHB9Q6PI77 547 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 TMEM207Q6UWW9 146 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 LEKR1Q6ZMV7 388 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 H2BFWTQ7Z2G1 175 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 KIRREL3Q8IZU9 778 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ALLCQ8N6M5 410 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 MAB21L3Q8N8X9 362 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 Q8N9G6 341 aaPredicted RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 MFSD9Q8NBP5 474 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 OR51G2Q8NGK0 314 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 OR9A1PQ8NGU1 263 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 LRRC15Q8TF66 581 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 GLYATL2Q8WU03 294 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 C10orf35Q96D05 121 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 OMA1Q96E52 524 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 SCRN2Q96FV2 425 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 PRRC1Q96M27 445 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 CENPKQ9BS16 269 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 RHNO1Q9BSD3 238 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 LRRC1Q9BTT6 524 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 FUCA2Q9BTY2 467 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 BLZF1Q9H2G9 400 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ANKRA2Q9H9E1 313 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 POLE4Q9NR33 117 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 CHRAC1Q9NRG0 131 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 MRPL22Q9NWU5 206 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 OCIAD1Q9NX40 245 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 ELOVL5Q9NYP7 299 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 NPIPA1Q9UND3 350 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 EIF3LQ9Y262 564 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 NOSIPQ9Y314 301 aaKnown RBP4.29□□□□□ -1.72
LSM5-205ENST00000409952 MAD1L1Q9Y6D9 718 aa4.29□□□□□ -1.72
LSM5-205ENST00000409952 NEDD4P46934 1319 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 LRIT2A6NDA9 550 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SLC1A7O00341 560 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SIGLEC5O15389 551 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ANGPTL1O95841 491 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 CST1P01037 141 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 FTH1P02794 183 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 NR3C1P04150 777 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 FHP07954 510 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 PRKAR1AP10644 381 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 LIFP15018 202 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ETS2P15036 469 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ANXA13P27216 316 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 HPCAL1P37235 193 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 NAMPTP43490 491 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 RPS5P46782 204 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 OR3A2P47893 321 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms