RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 IL6P05231 212 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 IL12BP29460 328 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 PRIM2P49643 509 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 MRPS22P82650 360 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 PLGLB1Q02325 96 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 KCNC4Q03721 635 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 SNTA1Q13424 505 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 TP53BP2Q13625 1128 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 HYAL4Q2M3T9 481 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 BICRALQ6AI39 1079 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 DESI1Q6ICB0 168 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 BNC2Q6ZN30 1099 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 SLC16A11Q8NCK7 471 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 OR4A15Q8NGL6 344 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 GPR151Q8TDV0 419 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 SLC9A6Q92581 669 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 RILPQ96NA2 401 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 CCDC115Q96NT0 180 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 OR52E6Q96RD3 313 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 NPHS2Q9NP85 383 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 GPATCH2Q9NW75 528 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 TUBA8Q9NY65 449 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 SEC14L3Q9UDX4 400 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 DCTN4Q9UJW0 460 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 MRTO4Q9UKD2 239 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 BOKQ9UMX3 212 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 NPIPA1Q9UND3 350 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 ZGRF1Q86YA3 2104 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 ACOT7O00154 380 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 ASNA1O43681 348 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 TRIM3O75382 744 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 UNC5CO95185 931 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 PPIAP62937 165 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 LRRC74AQ0VAA2 488 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 LASP1Q14847 261 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 PACS2Q86VP3 889 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 EFHD2Q96C19 240 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 NTNG2Q96CW9 530 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 THOC1Q96FV9 657 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 NODALQ96S42 347 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 ACTRT3Q9BYD9 372 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 METTL7AQ9H8H3 244 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 ZFP64Q9NPA5 681 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 GIN1Q9NXP7 522 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 BTNL2Q9UIR0 455 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 FAF1Q9UNN5 650 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 LRRK2Q5S007 2527 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 HS6ST1O60243 411 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 SOX30O94993 753 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 KCNH1O95259 989 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 IL33O95760 270 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 KRT16P08779 473 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 ALOX5P09917 674 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 ACP2P11117 423 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 SOAT1P35610 550 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 MDH1P40925 334 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 PSMD4P55036 377 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 STX1BP61266 288 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 IRX1P78414 480 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 DUSP5Q16690 384 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 SLC30A6Q6NXT4 461 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 PAOXQ6QHF9 649 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 GFRALQ6UXV0 394 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 OR5AK3PQ8NH89 298 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 GOT1L1Q8NHS2 421 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 RFWD2Q8NHY2 731 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 PIK3R3Q92569 461 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 JADE3Q92613 823 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 STACQ99469 402 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 YIPF4Q9BSR8 244 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 ZDHHC11Q9H8X9 412 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 DUSP22Q9NRW4 184 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 FGFR1OP2Q9NVK5 253 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 EML6Q6ZMW3 1958 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 NINQ8N4C6 2090 aa18.19■□□□□ 0.5
PDLIM2-207ENST00000409417 HIVEP3Q5T1R4 2406 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 GXYLT2A0PJZ3 443 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 PRAMEF25A6NGN4 478 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 LRRC3CA6NJW4 275 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 FAM166BA8MTA8 275 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 CPSF4O95639 269 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 UQCRC2P22695 453 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 ZFP36L2P47974 494 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 POLR2JP52435 117 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 KCNK10P57789 538 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 EIF2S3LQ2VIR3 472 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 CMPK2Q5EBM0 449 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 C6orf120Q7Z4R8 191 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 TMEM251Q8N6I4 163 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 OR9I1Q8NGQ6 314 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 FBXO30Q8TB52 745 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 RMND5BQ96G75 393 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 TMEM45AQ9NWC5 275 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 EXPH5Q8NEV8 1989 aa18.18■□□□□ 0.5
PDLIM2-207ENST00000409417 A0A0G2JND7 137 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 RNF103-CHMP3A0A140T963 221 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 FAM234BA2RU67 622 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 ICOSLGO75144 302 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 VIMP08670 466 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 MAN2A2P49641 1150 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms