RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SUPT3HB4E1H0 165 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SUPT3HO75486 399 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 REM1O75628 298 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NTN1O95631 604 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ATP1B1P05026 303 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CDC25BP30305 580 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OCRLQ01968 901 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MORF4L2Q15014 288 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TSC22D1Q15714 1073 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LIPJQ5W064 366 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLC48A1Q6P1K1 146 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SCIMPQ6UWF3 145 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GGNQ86UU5 652 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ARIH2OSQ8N7S6 290 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ACTRT1Q8TDG2 376 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GRK7Q8WTQ7 553 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LRRC39Q96DD0 335 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CNRIP1Q96F85 164 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MRPL1Q9BYD6 325 aaKnown RBP10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ACTR6Q9GZN1 396 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MED11Q9P086 117 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZNF175Q9Y473 711 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CMYA5Q8N3K9 4069 aa10.64□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FOXE1O00358 373 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KERAO60938 352 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 HK1P19367 917 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PTNP21246 168 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SSTR1P30872 391 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLC12A2P55011 1212 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FAPQ12884 760 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PDIA2Q13087 525 aaKnown RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TMEM44Q2T9K0 475 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ALKBH2Q6NS38 261 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 METTL25Q8N6Q8 603 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 L3MBTL4Q8NA19 623 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KBTBD8Q8NFY9 601 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 STAG3L4Q8TBR4 150 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SMAP2Q8WU79 429 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 EFHD2Q96C19 240 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TM4SF18Q96CE8 201 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NXNL1Q96CM4 212 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 REPS1Q96D71 796 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 VSTM2LQ96N03 204 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 BTBD9Q96Q07 612 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OSBPL9Q96SU4 736 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NAP1L3Q99457 506 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RBBP8Q99708 897 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KLHDC3Q9BQ90 382 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CENPKQ9BS16 269 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZBTB26Q9HCK0 441 aa10.63□□□□□ -0.71
SPTLC1P3-201ENST00000403408 H3BML4 177 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR7A17O14581 309 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SCO2O43819 266 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FADS1O60427 444 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ERAL1O75616 437 aaKnown RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SEC31AO94979 1220 aaKnown RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SEMA3DO95025 777 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SIX3O95343 332 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 S100BP04271 92 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PPP3CBP16298 524 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 STMN1P16949 149 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IL11P20809 199 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ARL4CP56559 192 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RAB10P61026 200 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IRF9Q00978 393 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GALNT1Q10472 559 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ETFDHQ16134 617 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZNF628Q5EBL2 1059 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NCMAPQ5T1S8 102 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RAET1LQ5VY80 246 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MFSD12Q6NUT3 480 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LARP4Q71RC2 724 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CHMP1BQ7LBR1 199 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GOLGA7Q7Z5G4 137 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MILR1Q7Z6M3 343 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CENPLQ8N0S6 344 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR10H5Q8NGA6 315 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR4K17Q8NGC6 315 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR52B6Q8NGF0 335 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KAT2AQ92830 837 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TMCO6Q96DC7 493 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TSPAN17Q96FV3 270 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LRRC1Q9BTT6 524 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TRAF4Q9BUZ4 470 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 WHRNQ9P202 907 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CFL2Q9Y281 166 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DYSFO75923 2080 aa10.62□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DPRXA6NFQ7 191 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CLOCKO15516 846 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SS18L1O75177 396 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GCM2O75603 506 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OPN1LWP04000 364 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms