RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 UCP1P25874 307 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ITGA3P26006 1051 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PIK3R1P27986 724 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 DUSP1P28562 367 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 GKP32189 559 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 HSPA9P38646 679 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 CD96P40200 585 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 GRIA1P42261 906 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 MTCP1P56278 107 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 GSDMDP57764 484 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TXNL4AP83876 142 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PDE1BQ01064 536 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 RAD51Q06609 339 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 RASGEF1BQ0VAM2 473 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 KRT81Q14533 505 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 MESDQ14696 234 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 SF3A2Q15428 464 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PCK2Q16822 640 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PNLIPRP3Q17RR3 467 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TBC1D25Q3MII6 688 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 SPANXN2Q5MJ10 180 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 NCBP2-AS2Q69YL0 99 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRMT10BQ6PF06 316 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 SIGLEC15Q6ZMC9 328 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 DPPA4Q7L190 304 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 MEPCEQ7L2J0 689 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 FAM124AQ86V42 546 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZC3HC1Q86WB0 502 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 CACUL1Q86Y37 369 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 STHQ8IWL8 128 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 GCNT2Q8N0V5 402 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TEX26Q8N6G2 289 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PQLC3Q8N755 202 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM217Q8N7C4 229 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PNPLA1Q8N8W4 532 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ASZ1Q8WWH4 475 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZCCHC14Q8WYQ9 949 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 AKAP1Q92667 903 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 FAM136AQ96C01 138 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZC3HAV1LQ96H79 300 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PPP1R16AQ96I34 528 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 CELF6Q96J87 481 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 HARBI1Q96MB7 349 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF641Q96N77 438 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 RNF157Q96PX1 679 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 CINPQ9BW66 212 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 C1QTNF3Q9BXJ4 246 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 NUSAP1Q9BXS6 441 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 FRMD8Q9BZ67 464 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 TM6SF2Q9BZW4 377 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 EBF2Q9HAK2 575 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 SDHAF3Q9NRP4 125 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 SEMA5BQ9P283 1151 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 PEF1Q9UBV8 284 aaKnown RBP4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 IFT52Q9Y366 437 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ALG6Q9Y672 507 aa4.99□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF106Q9H2Y7 1883 aaKnown RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 A1L4Q6 167 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 HEATR9A2RTY3 570 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TMEM8BA6NDV4 472 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ANKUB1A6NFN9 424 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PSMD11O00231 422 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DFFAO00273 331 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 FOXE1O00358 373 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 KPNA3O00505 521 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 TRAFD1O14545 582 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 VCYO14598 125 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 KLF11O14901 512 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 MATN3O15232 486 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PSMD3O43242 534 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RNF13O43567 381 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PLPP2O43688 288 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CBR3O75828 277 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 SERPINI2O75830 405 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 IGSF6O95976 241 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 HPXP02790 462 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 GLAP06280 429 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PROS1P07225 676 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CAPN1P07384 714 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 C1QTNF9P0C862 333 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF883P0CG24 379 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ZNF888P0CJ79 500 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RRASP10301 218 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 UMPSP11172 480 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PRPS2P11908 318 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 ENGP17813 658 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PCMT1P22061 227 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 NDUFS1P28331 727 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PTGER1P34995 402 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 PTGS2P35354 604 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CDKN2BP42772 138 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RGRP47804 291 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 CEBPDP49716 269 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 GTF2A1P52655 376 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RHOAP61586 193 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 AP1S1P61966 158 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 DLK1P80370 383 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 BNC1Q01954 994 aa4.98□□□□□ -1.61
HMGB3P7-201ENST00000400214 RHAGQ02094 409 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms