RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SENP5Q96HI0 755 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 SEZ6LQ9BYH1 1024 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CSNK1G3Q9Y6M4 447 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 M0R233 179 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SLC16A8O95907 504 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 GSTT2P0CG29 244 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 HOXB9P17482 250 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 C5AR1P21730 350 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 GCH1P30793 250 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PBX2P40425 430 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PITPNBP48739 271 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 RCAN2Q14206 197 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 TECRLQ5HYJ1 363 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CCNJQ5T5M9 372 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 HS3ST5Q8IZT8 346 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PSD4Q8NDX1 1056 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 HTRA2O43464 458 aaPredicted RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 GSRP00390 522 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 GTDC1Q4AE62 458 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 IL20RBQ6UXL0 311 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 TCEAL8Q8IYN2 117 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 CENPSQ8N2Z9 138 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 WDTC1Q8N5D0 677 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SIGLEC10Q96LC7 697 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SLAMF7Q9NQ25 335 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 ANKRD34BA5PLL1 514 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 OR1D4P47884 311 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SLC18B1Q6NT16 456 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 LILRB3O75022 631 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 FESP07332 822 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 LAMP1P11279 417 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 DCKP27707 260 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 RAB11BQ15907 218 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 OR5L2Q8NGL0 311 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 SLC22A2O15244 555 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 ABCB7O75027 752 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 AMY2AP04746 511 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 OR52W1Q6IF63 320 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SERINC5Q86VE9 423 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 ARL14Q8N4G2 192 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 URM1Q9BTM9 101 aaKnown RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 ULBP3Q9BZM4 244 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 CD320Q9NPF0 282 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SMAD6O43541 496 aaKnown RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 TIMP2P16035 220 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 KCNC3Q14003 757 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 TSPEARQ8WU66 669 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 AK6Q9Y3D8 172 aaKnown RBP13.04□□□□□ -0.32
VAPA-202ENST00000400000 PCDHGA1Q9Y5H4 931 aa13.04□□□□□ -0.32
VAPA-202ENST00000400000 A0A096LPI6 279 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF254O75437 659 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF865P0CJ78 1059 aaPredicted RBP13.03□□□□□ -0.32
VAPA-202ENST00000400000 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
VAPA-202ENST00000400000 P2RY14Q15391 338 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 OR5H2Q8NGV7 314 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 CDS1Q92903 461 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 NPIPB15A6NHN6 443 aaPredicted RBP13.03□□□□□ -0.32
VAPA-202ENST00000400000 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 FAAHO00519 579 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 SLITRK5O94991 958 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 CCL11P51671 97 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 CRISP1P54107 249 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZFAND4Q86XD8 727 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 NAGSQ8N159 534 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 BEST3Q8N1M1 668 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 OR5AK2Q8NH90 309 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
VAPA-202ENST00000400000 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ECHDC3Q96DC8 303 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF382Q96SR6 550 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 LPAR4Q99677 370 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ACTR10Q9NZ32 417 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 INMT-MINDY4F8WBC2 141 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF217O75362 1048 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 MPIG6BO95866 241 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 FBXO43Q4G163 708 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 GPR155Q7Z3F1 870 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 TECPR1Q7Z6L1 1165 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 FOXJ1Q92949 421 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 APOOQ9BUR5 198 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms