RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RNF130Q86XS8 419 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CYP4Z2PQ8N1L4 340 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZADH2Q8N4Q0 377 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TMEM156Q8N614 296 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FITM2Q8N6M3 262 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 BCORP1Q8N888 145 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CCDC197Q8NCU1 140 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR10G3Q8NGC4 313 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FAM110BQ8TC76 370 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RNF138Q8WVD3 245 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RCN3Q96D15 328 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SCMH1Q96GD3 660 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 STACQ99469 402 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR51I1Q9H343 314 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PIGUQ9H490 435 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PROK2Q9HC23 129 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DUSP22Q9NRW4 184 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GIN1Q9NXP7 522 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FLRT3Q9NZU0 649 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ABI3Q9P2A4 366 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RALYQ9UKM9 306 aaKnown RBP11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CBLCQ9ULV8 474 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GMEB1Q9Y692 573 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CHCHD2Q9Y6H1 151 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TTC36A6NLP5 189 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 BBIP1A8MTZ0 92 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 A8MVJ9 347 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HMGN4O00479 90 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CDK2AP1O14519 115 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NDUFAB1O14561 156 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MRASO14807 208 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ANGPT2O15123 496 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DPM1O60762 260 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 KCNK2O95069 426 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ALOX5P09917 674 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MATN1P21941 496 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PTGDSP41222 190 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MRPS22P82650 360 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OC90Q02509 493 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CYLC2Q14093 348 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CAPRIN1Q14444 709 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MAPRE2Q15555 327 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MAPK11Q15759 364 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PLEKHN1Q494U1 663 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CYP27C1Q4G0S4 372 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RUNDC3AQ59EK9 446 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 BHLHB9Q6PI77 547 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OLIG3Q7RTU3 272 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HPS6Q86YV9 775 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GPALPP1Q8IXQ4 340 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TAGAPQ8N103 731 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TRIML2Q8N7C3 387 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RP9Q8TA86 221 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GPR151Q8TDV0 419 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PAQR8Q8TEZ7 354 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TM9SF4Q92544 642 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 JADE3Q92613 823 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RAB8BQ92930 207 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NODALQ96S42 347 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CGREF1Q99674 301 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC39A3Q9BRY0 314 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 IL1RL2Q9HB29 575 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 Q9N2J8 555 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DEPPQ9NTK1 212 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ARL8BQ9NVJ2 186 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HPF1Q9NWY4 346 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LUZP4Q9P127 313 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CNOT11Q9UKZ1 510 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FAF1Q9UNN5 650 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 KALRNO60229 2985 aa11.41□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PINLYPA6NC86 204 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR6C70A6NIJ9 312 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CLIC1O00299 241 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ASNA1O43681 348 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 REM1O75628 298 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC25A12O75746 678 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DCTN3O75935 186 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SORBS2O94875 1100 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 KCNH1O95259 989 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ANP32DO95626 131 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 IL33O95760 270 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SP1P08047 785 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NUDT7P0C024 238 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR12D1P0DN82 309 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SFTPCP11686 197 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CYP4B1P13584 511 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ETFAP13804 333 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NAGAP17050 411 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PRDX6P30041 224 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CASRP41180 1078 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms