RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 KLK6Q92876 244 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 PBX4Q9BYU1 374 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 PRDM7Q9NQW5 492 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 ACSL5Q9ULC5 683 aa23.99■■□□□ 1.43
COL13A1-203ENST00000398969 CPSF4LA6NMK7 179 aaKnown RBP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 HOXB3P14651 431 aaPredicted RBP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 SOX18P35713 384 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 RAB28P51157 221 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 MRM1Q6IN84 353 aaKnown RBP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 VRK2Q86Y07 508 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ACOT4Q8N9L9 421 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ATP6V1C2Q8NEY4 427 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 SUSD6Q92537 303 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ZG16BQ96DA0 208 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 OR7D2Q96RA2 312 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 LMAN2LQ9H0V9 348 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 SLC38A1Q9H2H9 487 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 TRDV1A0A1B0GX56 115 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 AIFM1O95831 613 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 LALBAP00709 142 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 MYL9P24844 172 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 IL12RB1P42701 662 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 SLC1A3P43003 542 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 CHRNEQ04844 493 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 CDK10Q15131 360 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ABHD17CQ6PCB6 329 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 GET4Q7L5D6 327 aaPredicted RBP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 LHFPL3Q86UP9 236 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ASCC1Q8N9N2 400 aaKnown RBP23.98■■□□□ 1.43
COL13A1-203ENST00000398969 NR4A3Q92570 626 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 MOAP1Q96BY2 351 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 DEPDC7Q96QD5 511 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 PRRG3Q9BZD7 231 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 OSGEPL1Q9H4B0 414 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 ENTPD4Q9Y227 616 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 OR1A2Q9Y585 309 aa23.98■■□□□ 1.43
COL13A1-203ENST00000398969 A0A0B4J293 547 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 CSF2P04141 144 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 ALPPP05187 535 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 ACP5P13686 325 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 KIR2DL3P43628 341 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 OMPP47874 163 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 CDH11P55287 796 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 PPP3R1P63098 170 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 GALNT12Q8IXK2 581 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 POGLUT1Q8NBL1 392 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 LILRB4Q8NHJ6 448 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 RNF31Q96EP0 1072 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 TTYH2Q9BSA4 534 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 RNF121Q9H920 327 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 PRSS16Q9NQE7 514 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 MBNL1Q9NR56 388 aaKnown RBP23.97■■□□□ 1.43
COL13A1-203ENST00000398969 IMP3Q9NV31 184 aaKnown RBP23.97■■□□□ 1.43
COL13A1-203ENST00000398969 COMMD3Q9UBI1 195 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 NUFIP1Q9UHK0 495 aaKnown RBP23.97■■□□□ 1.43
COL13A1-203ENST00000398969 SLC13A4Q9UKG4 626 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 NDRG2Q9UN36 371 aaKnown RBP23.97■■□□□ 1.43
COL13A1-203ENST00000398969 CHST2Q9Y4C5 530 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 NOX1Q9Y5S8 564 aa23.97■■□□□ 1.43
COL13A1-203ENST00000398969 ATP5A1P25705 553 aaKnown RBP23.96■■□□□ 1.43
COL13A1-203ENST00000398969 HOXC5Q00444 222 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 C18orf63Q68DL7 685 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 GJD3Q8N144 294 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 FRMD6Q96NE9 622 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 TRMT61BQ9BVS5 477 aaKnown RBP23.96■■□□□ 1.43
COL13A1-203ENST00000398969 TEX101Q9BY14 249 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 NKX2-4Q9H2Z4 354 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 IGFLR1Q9H665 355 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 POLMQ9NP87 494 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-203ENST00000398969 GDE1Q9NZC3 331 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 CES1P1Q9UKY3 287 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 LIPT1Q9Y234 373 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 CASKO14936 926 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 LATO43561 262 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 GNSP15586 552 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 TRHRP34981 398 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-203ENST00000398969 PRR5P85299 388 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 ST3GAL3Q11203 375 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 UBE2J2Q8N2K1 259 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 OR4Q3Q8NH05 313 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 PIGXQ8TBF5 258 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 RNF170Q96K19 258 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 DCLRE1CQ96SD1 692 aaKnown RBP23.96■■□□□ 1.43
COL13A1-203ENST00000398969 GDF15Q99988 308 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 SLC6A20Q9NP91 592 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 EQTNQ9NQ60 294 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 CLCA2Q9UQC9 943 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 NUMA1Q14980 2115 aa23.96■■□□□ 1.43
COL13A1-203ENST00000398969 EPOPA6NHQ4 379 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 EMC8O43402 210 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 CH25HO95992 272 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 APEX1P27695 318 aaKnown RBP23.95■■□□□ 1.43
COL13A1-203ENST00000398969 PKLRP30613 574 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 LCN1P1Q5VSP4 162 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 AADACL4Q5VUY2 407 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 SLC30A6Q6NXT4 461 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 SLC48A1Q6P1K1 146 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 CACUL1Q86Y37 369 aa23.95■■□□□ 1.43
COL13A1-203ENST00000398969 OR4F15Q8NGB8 312 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms