RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ASCL4Q6XD76 172 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SSX9Q7RTT3 188 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 MAP7D3Q8IWC1 876 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 GATSQ8NAP1 163 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SYT14Q8NB59 555 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 OR2L3Q8NG85 312 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ADAMTS17Q8TE56 1095 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 GRAMD2BQ96HH9 432 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 METTL2AQ96IZ6 378 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TSSK2Q96PF2 358 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CCDC28BQ9BUN5 200 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SPRTNQ9H040 489 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SLC38A10Q9HBR0 1119 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 RBAKQ9NYW8 714 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ADA2Q9NZK5 511 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 NOP53Q9NZM5 478 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 PLEKHB1Q9UF11 243 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SIX4Q9UIU6 781 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ACSL5Q9ULC5 683 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 HEMK1Q9Y5R4 338 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TNFRSF18Q9Y5U5 241 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ZNF831Q5JPB2 1677 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CARMIL3Q8ND23 1372 aa6.21□□□□□ -1.41
SMCO1-201ENST00000397537 UBN2Q6ZU65 1347 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 A0A1W2PPC1 479 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 TMEM150CB9EJG8 249 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SLCO1B7G3V0H7 640 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CYP7B1O75881 506 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 RGS11O94810 467 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 FARP2O94887 1054 aaPredicted RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 BAG3O95817 575 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SERPINB2P05120 415 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 STSP08842 583 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CHRNB1P11230 501 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CRABP2P29373 138 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 TMED10P49755 219 aaKnown RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 METAP2P50579 478 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SP3Q02447 781 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CFHR3Q02985 330 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 ART3Q13508 389 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 MRPL23Q16540 153 aaKnown RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SLC5A12Q1EHB4 618 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 LSM12Q3MHD2 195 aaKnown RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PRR31Q5SQ13 230 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 LIPJQ5W064 366 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SLC22A10Q63ZE4 541 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 G2E3Q7L622 706 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PAGE2Q7Z2X7 111 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PARGQ86W56 976 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CNGA4Q8IV77 575 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 DEFB123Q8N688 67 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 MLKLQ8NB16 471 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CYB561A3Q8NBI2 242 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF248Q8NDW4 579 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 OR4D6Q8NGJ1 314 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PLEKHA8Q96JA3 519 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CCDC17Q96LX7 622 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 TGM7Q96PF1 710 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 LMF2Q9BU23 707 aaKnown RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 GATA5Q9BWX5 397 aaPredicted RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 OSBPL1AQ9BXW6 950 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 RANBP3Q9H6Z4 567 aaPredicted RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 IL1RL2Q9HB29 575 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 NT5MQ9NPB1 228 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PRDM7Q9NQW5 492 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SLC2A4RGQ9NR83 387 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 TXLNGQ9NUQ3 528 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 MRPL39Q9NYK5 338 aaKnown RBP6.21□□□□□ -1.42
SMCO1-201ENST00000397537 C1RLQ9NZP8 487 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 EMCNQ9ULC0 261 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 WDR83OSQ9Y284 106 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 NME7Q9Y5B8 376 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 NPTNQ9Y639 398 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 CACNG2Q9Y698 323 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 SLX4Q8IY92 1834 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PIEZO1Q92508 2521 aa6.21□□□□□ -1.42
SMCO1-201ENST00000397537 PPIAL4EA0A075B759 164 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 GSTTP1A0A1W2PQM5 241 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 RAB19A4D1S5 217 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CASTOR2A6NHX0 329 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 A8MU76 341 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 BTBD19C9JJ37 291 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 BTN3A3O00478 584 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CLDN5O00501 218 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SCO2O43819 266 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SHOX2O60902 331 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 NDUFA7O95182 113 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 FCER2P06734 321 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SNRPAP09012 282 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PPIAL4FP0DN26 164 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 HOXB8P17481 243 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 FPR3P25089 353 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PPP2R1BP30154 601 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 EIF2S3P41091 472 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 NKX2-1P43699 371 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CASP4P49662 377 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SCRN3Q0VDG4 424 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PNRC1Q12796 327 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms