RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SLC35A4Q96G79 324 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 GPR22Q99680 433 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 LRRC1Q9BTT6 524 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 NTMT1Q9BV86 223 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 ITPAQ9BY32 194 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 ALG2Q9H553 416 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 CAB39LQ9H9S4 337 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 EML4Q9HC35 981 aaKnown RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 DKKL1Q9UK85 242 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PROCRQ9UNN8 238 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 MTO1Q9Y2Z2 717 aaKnown RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF175Q9Y473 711 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 EFCAB8A8MWE9 144 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 CLOCKO15516 846 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 GBAP04062 536 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ATP1B1P05026 303 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 DANCRP0C864 163 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 STMN1P16949 149 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 GRK2P25098 689 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 DSCR4P56555 118 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ARL4CP56559 192 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 EXOSC7Q15024 291 aaKnown RBP8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ZKSCAN8Q15776 578 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 FAM111BQ6SJ93 734 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 FAM214BQ7L5A3 538 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ISCA2Q86U28 154 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 FBXO36Q8NEA4 188 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 RAB3IL1Q8TBN0 382 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 WDR20Q8TBZ3 569 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ACTRT1Q8TDG2 376 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ANP32BQ92688 251 aaKnown RBP8.44□□□□□ -1.06
NEDD9-203ENST00000397378 EXT2Q93063 718 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 COL21A1Q96P44 957 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ATOH8Q96SQ7 321 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 PINK1Q9BXM7 581 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 MANSC1Q9H8J5 431 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 SMYD2Q9NRG4 433 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 PLSCR4Q9NRQ2 329 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 MAT2BQ9NZL9 334 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 PRODH2Q9UF12 536 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 BCAP29Q9UHQ4 241 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 ADAM29Q9UKF5 820 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 CES1P1Q9UKY3 287 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 PLLPQ9Y342 182 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 JRKLQ9Y4A0 524 aa8.44□□□□□ -1.06
NEDD9-203ENST00000397378 NOTCH1P46531 2555 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 LOC100289279A0A1B0GTE1 492 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GOLGA6L6A8MZA4 724 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 B4DXG7 233 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 E7ESA3 106 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 LINC01387J3KSC0 135 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 UBXN8O00124 270 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 TSPAN2O60636 221 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 KERAO60938 352 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 REM1O75628 298 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 CBX7O95931 251 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 ALDOAP04075 364 aaKnown RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 FCGR2AP12318 317 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 SLC25A16P16260 332 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 IL11P20809 199 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GZMKP49863 264 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 EMDP50402 254 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 SUCLG1P53597 346 aaKnown RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GAS1P54826 345 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 DSCR9P59020 149 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 RAB10P61026 200 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 PSPHP78330 225 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 EFR3AQ14156 821 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 PON3Q15166 354 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 NRF1Q16656 503 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 EXOC3L2Q2M3D2 409 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 OR5M10Q6IEU7 315 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 MYLK4Q86YV6 388 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 UBQLNLQ8IYU4 475 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 TEX9Q8N6V9 391 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 FADS6Q8N9I5 356 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 L3MBTL4Q8NA19 623 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 ADCY4Q8NFM4 1077 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 OR10H5Q8NGA6 315 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 OR6K3Q8NGY3 331 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 FNDC9Q8TBE3 224 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GCDHQ92947 438 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 TMBIM1Q969X1 311 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 BTBD9Q96Q07 612 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 SERPINI1Q99574 410 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 BRINP2Q9C0B6 783 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 DDX47Q9H0S4 455 aaKnown RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 ALG9Q9H6U8 611 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 NMRAL1Q9HBL8 299 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 FANCFQ9NPI8 374 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 WHRNQ9P202 907 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 GPR55Q9Y2T6 319 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-203ENST00000397378 RNF115Q9Y4L5 304 aa8.43□□□□□ -1.06
NEDD9-203ENST00000397378 UQCRHLA0A096LP55 91 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms