RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CT62P0C5K7 136 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 COL8A1P27658 744 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 EMP2P54851 167 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 RBBP4Q09028 425 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MGAT2Q10469 447 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MRPL49Q13405 166 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 CCNIQ14094 377 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ELAVL1Q15717 326 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 ADRM1Q16186 407 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 FXNQ16595 210 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 LCN8Q6JVE9 175 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 DGAT2L6Q6ZPD8 337 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MAMDC2Q7Z304 686 aaPredicted RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 SPPL2CQ8IUH8 684 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 TMEM151BQ8IW70 566 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MAL2Q969L2 176 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CTHRC1Q96CG8 243 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 RSRC1Q96IZ7 334 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 NSMCE2Q96MF7 247 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 YIPF4Q9BSR8 244 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CRB3Q9BUF7 120 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CNPPD1Q9BV87 410 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ACTRT3Q9BYD9 372 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 OR51I1Q9H343 314 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 TMEM38AQ9H6F2 299 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 DUXAA6NLW8 204 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 C5orf58C9J3I9 102 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ALOX12BO75342 701 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CLDN1O95832 211 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 CD63P08962 238 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 OR12D1P0DN82 309 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 DCTP40126 519 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 SCARB2Q14108 478 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 VEZF1Q14119 521 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 EXOSC7Q15024 291 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 ZNF630Q2M218 657 aaPredicted RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 FAAH2Q6GMR7 532 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MFSD12Q6NUT3 480 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 SLC30A8Q8IWU4 369 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 RBMXL3Q8N7X1 1067 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 OR52R1Q8NGF1 315 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ADAMTS15Q8TE58 950 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 XAGE5Q8WWM1 108 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 DAZLQ92904 295 aaKnown RBP12.29□□□□□ -0.44
SEC13-209ENST00000397117 RAB8BQ92930 207 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 C16orf58Q96GQ5 468 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 ERVK-19Q9WJR5 959 aa12.29□□□□□ -0.44
SEC13-209ENST00000397117 POLEQ07864 2286 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 FER1L5A0AVI2 2057 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 AQP12BA6NM10 295 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 A8MUA0 341 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 HMGN4O00479 90 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 DPM1O60762 260 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 PRAMEF2O60811 474 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 CBX7O95931 251 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 AGR2O95994 175 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 CYC1P08574 325 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 BMP2P12643 396 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ATP6V1B2P21281 511 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 PCGF2P35227 344 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 CDK6Q00534 326 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ZNF155Q12901 538 aaPredicted RBP12.28□□□□□ -0.44
SEC13-209ENST00000397117 GNA13Q14344 377 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 NCF4Q15080 339 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 MTX3Q5HYI7 312 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ATAD3BQ5T9A4 648 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
SEC13-209ENST00000397117 ZCCHC12Q6PEW1 402 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 FAM198BQ6UWH4 519 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 SLC44A2Q8IWA5 706 aaPredicted RBP12.28□□□□□ -0.44
SEC13-209ENST00000397117 AQP12AQ8IXF9 295 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 OR7G1Q8NGA0 311 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 OR5D16Q8NGK9 328 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 OR14A16Q8NHC5 309 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 NFKBIDQ8NI38 313 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 FBXO30Q8TB52 745 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 PTPMT1Q8WUK0 201 aaPredicted RBP12.28□□□□□ -0.44
SEC13-209ENST00000397117 SLC9A6Q92581 669 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 GIMAP5Q96F15 307 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ART5Q96L15 291 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 SPSB2Q99619 263 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 A4GALTQ9NPC4 353 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 P2RX2Q9UBL9 471 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 C19orf25Q9UFG5 118 aaPredicted RBP12.28□□□□□ -0.44
SEC13-209ENST00000397117 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
SEC13-209ENST00000397117 ASNA1O43681 348 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms