RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 HK1P19367 917 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 DEKP35659 375 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 PNLIPRP2P54317 469 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 GPX6P59796 221 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SRSF2Q01130 221 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 PPP1R7Q15435 360 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CTU2Q2VPK5 515 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 GLYR1Q49A26 553 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 OR2M3Q8NG83 312 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 WDR20Q8TBZ3 569 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 EXT2Q93063 718 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 GMPPAQ96IJ6 420 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 PBKQ96KB5 322 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 HS6ST2Q96MM7 605 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 BTBD9Q96Q07 612 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ADOQ96SZ5 270 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SHARPINQ9H0F6 387 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 DSN1Q9H410 356 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ASIC3Q9UHC3 531 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 PCDHA9Q9Y5H5 950 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ELOA3DA6NLF2 546 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 UGDHO60701 494 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CT45A8P0DMV1 189 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CT45A9P0DMV2 189 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SLC6A8P48029 635 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CASP9P55211 416 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 DUSP2Q05923 314 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 FAPQ12884 760 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 GANABQ14697 944 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ELOA3BQ3SY89 546 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 TRMT12Q53H54 448 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 CT45A2Q5DJT8 189 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 RAET1LQ5VY80 246 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SLC48A1Q6P1K1 146 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 TEX9Q8N6V9 391 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 STEAP2Q8NFT2 490 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ELOA3Q8NG57 546 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 STAG3L4Q8TBR4 150 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 GFM2Q969S9 779 aaKnown RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ATOH8Q96SQ7 321 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 NAP1L3Q99457 506 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SERPINI1Q99574 410 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 NTMT1Q9BV86 223 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 LZTFL1Q9NQ48 299 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 SMYD2Q9NRG4 433 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 ADAM29Q9UKF5 820 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 AP4B1Q9Y6B7 739 aa7.54□□□□□ -1.2
SCFD1-202ENST00000396629 MALRD1Q5VYJ5 2156 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 GOLGA6L10A6NI86 522 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 H3BML4 177 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 UBXN8O00124 270 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 CLOCKO15516 846 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 SSX4O60224 188 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 FESP07332 822 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 CSNK2A2P19784 350 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-202ENST00000396629 FEN1P39748 380 aaKnown RBP7.53□□□□□ -1.2
SCFD1-202ENST00000396629 CTBP2P56545 445 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 DSCR9P59020 149 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 PSPHP78330 225 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 SLMAPQ14BN4 828 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 ZKSCAN8Q15776 578 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-202ENST00000396629 NRF1Q16656 503 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 CYB5R2Q6BCY4 276 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 LARP4Q71RC2 724 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCFD1-202ENST00000396629 ISCA2Q86U28 154 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 GGNQ86UU5 652 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 L3MBTL4Q8NA19 623 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 OR5M1Q8NGP8 315 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 GPR22Q99680 433 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 HDHD5Q9BXW7 423 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 TRIM2Q9C040 744 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 ALG9Q9H6U8 611 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 ZBTB26Q9HCK0 441 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 SAYSD1Q9NPB0 183 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 GLRX2Q9NS18 164 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 PPP4R1LQ9P1A2 415 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 CLEC4AQ9UMR7 237 aa7.53□□□□□ -1.2
SCFD1-202ENST00000396629 DYSFO75923 2080 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 UQCRHLA0A096LP55 91 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 C1orf226A1L170 272 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 FAM234BA2RU67 622 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 SUPT3HB4E1H0 165 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 PGRMC1O00264 195 aaKnown RBP7.52□□□□□ -1.2
SCFD1-202ENST00000396629 KERAO60938 352 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 SUPT3HO75486 399 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 BCAS2O75934 225 aaPredicted RBP7.52□□□□□ -1.2
SCFD1-202ENST00000396629 PGRP06401 933 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 KLK1P06870 262 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 MTHFD2P13995 350 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 PCSK2P16519 638 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 STMN1P16949 149 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 SRD5A1P18405 259 aa7.52□□□□□ -1.2
SCFD1-202ENST00000396629 IL12BP29460 328 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms