RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 BMP8AQ7Z5Y6 402 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 RNF130Q86XS8 419 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SFTPA1Q8IWL2 248 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPALPP1Q8IXQ4 340 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ADGRF3Q8IZF5 1079 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 HDDC3Q8N4P3 179 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 LINC00471Q8N535 108 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PNPLA1Q8N8W4 532 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TTC29Q8NA56 475 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 TFGQ92734 400 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 RIT1Q92963 219 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TM4SF18Q96CE8 201 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PYURFQ96I23 114 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPR137Q96N19 417 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CLUHP3Q96NS8 147 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 EGFL8Q99944 293 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 AICDAQ9GZX7 198 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PRDM7Q9NQW5 492 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PRMT8Q9NR22 394 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 WSB2Q9NYS7 404 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 SERGEFQ9UGK8 458 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SLC22A7Q9Y694 548 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 LRIT2A6NDA9 550 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GABRR3A8MPY1 467 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C2CD4DB7Z1M9 353 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 H3BMH7 237 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SYT5O00445 386 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CXCR6O00574 342 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TOR1AO14656 332 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 RGS5O15539 181 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KIAA0513O60268 411 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GCM2O75603 506 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 SLC22A5O76082 557 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 HOXD4P09016 255 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 CYP4B1P13584 511 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 EPHA2P29317 976 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C21orf33P30042 268 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 RPL35P42766 123 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 RPL38P63173 70 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 SCN1BQ07699 218 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 RGS1Q08116 209 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 XKR6Q5GH73 641 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SPANXN4Q5MJ08 99 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CLVS2Q5SYC1 327 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KIAA1211LQ6NV74 962 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TMIGD1Q6UXZ0 262 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CEP68Q76N32 757 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 COMMD6Q7Z4G1 85 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PRSS42Q7Z5A4 293 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 FAM124AQ86V42 546 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 UBALD2Q8IYN6 164 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C9orf62Q8N4C0 152 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ANKRD53Q8N9V6 530 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 UBE2FQ969M7 185 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GAL3ST3Q96A11 431 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TRMT61AQ96FX7 289 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 ZC3HAV1LQ96H79 300 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 HRASLS5Q96KN8 279 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 OR52E6Q96RD3 313 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CD180Q99467 661 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 LGR4Q9BXB1 951 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SARS2Q9NP81 518 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 SIRT3Q9NTG7 399 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 EVA1BQ9NVM1 165 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPATCH2Q9NW75 528 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ZNF224Q9NZL3 707 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CYB5R1Q9UHQ9 305 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 FANCMQ8IYD8 2048 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 LOC100506127A0A0U1RQW1 187 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SPTY2D1-AS1A0A0U1RR47 76 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CLCA1A8K7I4 914 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PLPP1O14494 284 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 TOX3O15405 576 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 CREG1O75629 220 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SERPINI2O75830 405 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CCNYL3P0C7X3 344 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 HOXB1P14653 301 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 ZNF250P15622 560 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 AKT2P31751 481 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 EVI2BP34910 448 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KIR2DL3P43628 341 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 PER3P56645 1201 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DLX2Q07687 328 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 RGNQ15493 299 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 FAM174BQ3ZCQ3 159 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 FHL5Q5TD97 284 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C6orf15Q6UXA7 325 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPAT4Q86UL3 456 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DNAJC22Q8N4W6 341 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 OR2L3Q8NG85 312 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GPR151Q8TDV0 419 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 GGHQ92820 318 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 MYDGFQ969H8 173 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 RGMAQ96B86 450 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ZNF681Q96N22 645 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CDK15Q96Q40 435 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KCNS3Q9BQ31 491 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms