RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 FANCFQ9NPI8 374 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 MOCS1Q9NZB8 636 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 EHD3Q9NZN3 535 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 DKKL1Q9UK85 242 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 RAB21Q9UL25 225 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 WNK1Q9H4A3 2382 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 NPEPPSL1A6NEC2 478 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 OR6C70A6NIJ9 312 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 GLOD5A6NK44 160 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TO15178 435 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF37AP17032 561 aaPredicted RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TCEA1P23193 301 aaKnown RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TLX1P31314 330 aaPredicted RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TTKP33981 857 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TSC22D1Q15714 1073 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 TBCCQ15814 346 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 KHDRBS2Q5VWX1 349 aaKnown RBP12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 OR5M10Q6IEU7 315 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 DEF8Q6ZN54 512 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 GSTA5Q7RTV2 222 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 GGNQ86UU5 652 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 SLC35A4Q96G79 324 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 ITPAQ9BY32 194 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF639Q9UID6 485 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 CLEC4AQ9UMR7 237 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.46
VCPKMT-201ENST00000395859 A0A0A6YYD5 115 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 E7EQL1 145 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 PLPP1O14494 284 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 SEC14L5O43304 696 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 TMPRSS11DO60235 418 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 TGFAP01135 160 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 TGFB1P01137 390 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 CCDC166P0CW27 439 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 PYGBP11216 843 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 GRK2P25098 689 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 BUD31P41223 144 aaPredicted RBP12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 NR4A2P43354 598 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 NEK2P51955 445 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 ARFIP1P53367 373 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 CDH11P55287 796 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 PLCXD2Q0VAA5 305 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 P2RY6Q15077 328 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 RAB35Q15286 201 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 SFRP5Q5T4F7 317 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 MCUQ8NE86 351 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 DTNBP1Q96EV8 351 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 EGFL8Q99944 293 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 OR51B5Q9H339 312 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
VCPKMT-201ENST00000395859 PGRMC2O15173 223 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 FGGP02679 453 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 NR2F6P10588 404 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 EFNA4P52798 201 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 IRF9Q00978 393 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 LAPTM5Q13571 262 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 TMEM44Q2T9K0 475 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 TEX35Q5T0J7 233 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 MFSD12Q6NUT3 480 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 EXOC3L1Q86VI1 746 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 ZNF619Q8N2I2 560 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 LRRC17Q8N6Y2 441 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 BANPQ8N9N5 519 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 ZBTB26Q9HCK0 441 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
VCPKMT-201ENST00000395859 CLGNO14967 610 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 SMAD9O15198 467 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 TSPAN2O60636 221 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 LY6HO94772 140 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 DRD5P21918 477 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 AGTR1P30556 359 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 BSGP35613 385 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 KCNJ1P48048 391 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 ACTG1P63261 375 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 GGTLC2Q14390 218 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 TSNQ15631 228 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 RAET1LQ5VY80 246 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms