RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 STX4Q12846 297 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 MYBPC3Q14896 1274 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 TRMT12Q53H54 448 aaKnown RBP10.62□□□□□ -0.71
RTN1-203ENST00000395090 VWA2Q5GFL6 755 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 MTX3Q5HYI7 312 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 ARHGAP40Q5TG30 622 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 ZFP1Q6P2D0 407 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 CEACAM20Q6UY09 585 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 HORMAD2Q8N7B1 307 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 C11orf65Q8NCR3 313 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 PLPP5Q8NEB5 264 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 STMN2Q93045 179 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 POP5Q969H6 163 aaKnown RBP10.62□□□□□ -0.71
RTN1-203ENST00000395090 PPWD1Q96BP3 646 aaKnown RBP10.62□□□□□ -0.71
RTN1-203ENST00000395090 CLIP3Q96DZ5 547 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 LRGUKQ96M69 825 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 CTRCQ99895 268 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 SLC7A5P2Q9GIP4 190 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 SERHL2Q9H4I8 314 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 CXorf21Q9HAI6 301 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 RNPEPL1Q9HAU8 725 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 NECTIN3Q9NQS3 549 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 SLC39A1Q9NY26 324 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 MAT2BQ9NZL9 334 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 RAPGEFL1Q9UHV5 662 aa10.62□□□□□ -0.71
RTN1-203ENST00000395090 FAF1Q9UNN5 650 aaPredicted RBP10.62□□□□□ -0.71
RTN1-203ENST00000395090 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 VSTM2BA6NLU5 285 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 H3BNX3 289 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 GSTA4O15217 222 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 GMNNO75496 209 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 KRT36O76013 467 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 TFPTP0C1Z6 253 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 UMPSP11172 480 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 MATN1P21941 496 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 PCGF2P35227 344 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 PRIM2P49643 509 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ERFP50548 548 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 CASP9P55211 416 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 DSTNP60981 165 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 MRPS35P82673 323 aaKnown RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 RHAGQ02094 409 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 TP53BP2Q13625 1128 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ZNF630Q2M218 657 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 GCNT6Q5T4J0 391 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 IRAK1BP1Q5VVH5 260 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ZCCHC12Q6PEW1 402 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 FAM111BQ6SJ93 734 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ANGPTL8Q6UXH0 198 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ZNF517Q6ZMY9 492 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 DGAT2L6Q6ZPD8 337 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 CCDC80Q76M96 950 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 RAB11FIP2Q7L804 512 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 MAMDC2Q7Z304 686 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 SPATA24Q86W54 205 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 METTL25Q8N6Q8 603 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 NUP43Q8NFH3 380 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 FIG4Q92562 907 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 HOXB13Q92826 284 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 RIT1Q92963 219 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 MAL2Q969L2 176 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 SLCO4A1Q96BD0 722 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 NSMCE2Q96MF7 247 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 ZNF578Q96N58 590 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 PELOQ9BRX2 385 aaKnown RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 SLC26A1Q9H2B4 701 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 A4GALTQ9NPC4 353 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 CCM2LQ9NUG4 571 aaPredicted RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 DCAF13Q9NV06 445 aaKnown RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
RTN1-203ENST00000395090 LOXL2Q9Y4K0 774 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 FER1L5A0AVI2 2057 aa10.61□□□□□ -0.71
RTN1-203ENST00000395090 MYOCOSA0A1B0GUC4 107 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 TCRBV16S1A1N1A0A5B0 115 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 SYNDIG1LA6NDD5 238 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 ASNA1O43681 348 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 OR10H2O60403 315 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 CSO75390 466 aaKnown RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 CT62P0C5K7 136 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 ZNF28P17035 718 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 CSRP1P21291 193 aaKnown RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 NT5EP21589 574 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 SLC7A1P30825 629 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 KDELR2P33947 212 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 MAP3K8P41279 467 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 EFNA3P52797 238 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 PRKAG1P54619 331 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 AP2B1P63010 937 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 MRPS22P82650 360 aaKnown RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 CDK6Q00534 326 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 EIF3IQ13347 325 aaKnown RBP10.6□□□□□ -0.71
RTN1-203ENST00000395090 TESK1Q15569 626 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 MAPK11Q15759 364 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
RTN1-203ENST00000395090 CCDC157Q569K6 752 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms