RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NUP54Q7Z3B4 507 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 SIAH3Q8IW03 269 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 STON2Q8WXE9 905 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 SLC35A4Q96G79 324 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 ZNF317Q96PQ6 595 aaPredicted RBP18.27■□□□□ 0.52
SNCA-203ENST00000394986 SIKE1Q9BRV8 207 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 DOHHQ9BU89 302 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 TTTY12Q9BZ98 90 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 SERHL2Q9H4I8 314 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 GALNT9Q9HCQ5 603 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 RYDENQ9NUL5 291 aaKnown RBP18.27■□□□□ 0.52
SNCA-203ENST00000394986 CNIH4Q9P003 139 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 BTNL2Q9UIR0 455 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 VPS4AQ9UN37 437 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 OR6C70A6NIJ9 312 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 NPIPA5E9PKD4 350 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 HS6ST1O60243 411 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 IGKV1D-16P01601 117 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 IL6P05231 212 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 GSNP06396 782 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 ALOX5P09917 674 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 CYP4B1P13584 511 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 MRPL19P49406 292 aaKnown RBP18.26■□□□□ 0.51
SNCA-203ENST00000394986 PRIM2P49643 509 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 FOXO1Q12778 655 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 VPS26BQ4G0F5 336 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 CYP27C1Q4G0S4 372 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 GK5Q6ZS86 529 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 ATCAYQ86WG3 371 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 MOAP1Q96BY2 351 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 JSRP1Q96MG2 331 aaPredicted RBP18.26■□□□□ 0.51
SNCA-203ENST00000394986 PANX1Q96RD7 426 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 METTL7AQ9H8H3 244 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 FLRT3Q9NZU0 649 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 NPIPA1Q9UND3 350 aa18.26■□□□□ 0.51
SNCA-203ENST00000394986 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.26■□□□□ 0.51
SNCA-203ENST00000394986 FAM234BA2RU67 622 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 C2orf72A6NCS6 295 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 LRRC3CA6NJW4 275 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 TFECO14948 347 aaPredicted RBP18.25■□□□□ 0.51
SNCA-203ENST00000394986 CBX6O95503 412 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 PTGDSP41222 190 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 CASP3P42574 277 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 KCNK10P57789 538 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 MRPS22P82650 360 aaKnown RBP18.25■□□□□ 0.51
SNCA-203ENST00000394986 SQLEQ14534 574 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 DECR1Q16698 335 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 FIGNL1Q6PIW4 674 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 C6orf120Q7Z4R8 191 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 FUNDC1Q8IVP5 155 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 POGLUT1Q8NBL1 392 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 GALNT11Q8NCW6 608 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 OR5D16Q8NGK9 328 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 CDS1Q92903 461 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 SECISBP2Q96T21 854 aaKnown RBP18.25■□□□□ 0.51
SNCA-203ENST00000394986 ANGPTL4Q9BY76 406 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 ACTRT3Q9BYD9 372 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 SERHLQ9NQF3 203 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 SLC6A13Q9NSD5 602 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 KLRF1Q9NZS2 232 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 CCDC167Q9P0B6 97 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 FAF1Q9UNN5 650 aaPredicted RBP18.25■□□□□ 0.51
SNCA-203ENST00000394986 HRH3Q9Y5N1 445 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 KCNE3Q9Y6H6 103 aa18.25■□□□□ 0.51
SNCA-203ENST00000394986 PRAMEF25A6NGN4 478 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 NR5A2O00482 541 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ZNHIT1O43257 154 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ICOSLGO75144 302 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 UQCRC2P22695 453 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ATP4BP51164 291 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ARFIP2P53365 341 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 PNLIPRP2P54317 469 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 PSPHP78330 225 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 RPP38P78345 283 aaKnown RBP18.24■□□□□ 0.51
SNCA-203ENST00000394986 CCNJQ5T5M9 372 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 CDC73Q6P1J9 531 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ZCCHC12Q6PEW1 402 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ZAR1Q86SH2 424 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 COX18Q8N8Q8 333 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ST6GALNAC3Q8NDV1 305 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 OR52N2Q8NGI0 321 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 GOT1L1Q8NHS2 421 aaPredicted RBP18.24■□□□□ 0.51
SNCA-203ENST00000394986 SLC35G5Q96KT7 338 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ZNF385DQ9H6B1 395 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 FBXO34Q9NWN3 711 aa18.24■□□□□ 0.51
SNCA-203ENST00000394986 ANKRD33BA6NCL7 494 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 ANKUB1A6NFN9 424 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 CCDC154A6NI56 674 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 TTC36A6NLP5 189 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 C17orf51A8MQB3 221 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 ABCB7O75027 752 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 TRIM3O75382 744 aaPredicted RBP18.23■□□□□ 0.51
SNCA-203ENST00000394986 GLSO94925 669 aaPredicted RBP18.23■□□□□ 0.51
SNCA-203ENST00000394986 KCNK2O95069 426 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 UNC5CO95185 931 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 KCNH1O95259 989 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 IL33O95760 270 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 RFPL3SP0C7P2 107 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 EDN3P14138 238 aa18.23■□□□□ 0.51
SNCA-203ENST00000394986 MAGEA5P43359 124 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms