RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PYHIN1Q6K0P9 492 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 NEIL3Q8TAT5 605 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 ECHDC3Q96DC8 303 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 MRPS24Q96EL2 167 aaKnown RBP17.76■□□□□ 0.43
HOXC6-202ENST00000394331 APIPQ96GX9 242 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 CDCP1Q9H5V8 836 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 CLEC4EQ9ULY5 219 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 ANAPC1Q9H1A4 1944 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 IGLV3-16A0A075B6K0 115 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 J3KTA2 159 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 PRAF2O60831 178 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 NFATC1O95644 943 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 TYRP14679 529 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 AOAHP28039 575 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 TAP2Q03519 686 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 HIST2H2AA3Q6FI13 130 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 CAMKMTQ7Z624 323 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 RERGLQ9H628 205 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 GAREM1Q9H706 876 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 METTL17Q9H7H0 456 aaPredicted RBP17.76■□□□□ 0.43
HOXC6-202ENST00000394331 SLC6A5Q9Y345 797 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 PCDHGA9Q9Y5G4 932 aaKnown RBP17.76■□□□□ 0.43
HOXC6-202ENST00000394331 CARNS1A5YM72 827 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 L7N2F9 121 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 GABRR2P28476 465 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 B4GALNT1Q00973 533 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SYT12Q8IV01 421 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 TCEANCQ8N8B7 351 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 L3MBTL4Q8NA19 623 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF485Q8NCK3 441 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SKA2Q8WVK7 121 aaPredicted RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 MS4A3Q96HJ5 214 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 YIPF4Q9BSR8 244 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ASB6Q9NWX5 421 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF624Q9P2J8 865 aaPredicted RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF282Q9UDV7 671 aaPredicted RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 FBXL2Q9UKC9 423 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 PCDH7O60245 1069 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 RNGTTO60942 597 aaKnown RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 CBX7O95931 251 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 OPN1SWP03999 348 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 MPC1LP0DKB6 136 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 CXCL2P19875 107 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ACSL1P33121 698 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 XKP51811 444 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SLC7A9P82251 487 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 PTSQ03393 145 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ACSM1Q08AH1 577 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 XKR6Q5GH73 641 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 UNC5DQ6UXZ4 953 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 NAGSQ8N159 534 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 ASB11Q8WXH4 323 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 C10orf90Q96M02 699 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 DNTTIP1Q9H147 329 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 TMEM38AQ9H6F2 299 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SLC16A5O15375 505 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 RORAP35398 523 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 CHI3L1P36222 383 aaPredicted RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SLC6A12P48065 614 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 RPS7P62081 194 aaKnown RBP17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SEMG2Q02383 582 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 HFEQ30201 348 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 RAB11FIP2Q7L804 512 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 RPLP0P6Q8NHW5 317 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 FGF11Q92914 225 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 APOLD1Q96LR9 279 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 CACNG6Q9BXT2 260 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 C11orf49Q9H6J7 331 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 EQTNQ9NQ60 294 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 BABAM2Q9NXR7 383 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 MLXQ9UH92 298 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 SPATA2Q9UM82 520 aa17.75■□□□□ 0.43
HOXC6-202ENST00000394331 FAM74A7A6NL05 159 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 NPR2P20594 1047 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SELENOPP49908 381 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SHC2P98077 582 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 FAM74A3Q4VXF1 159 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SYT14P1Q58G82 188 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 HBMQ6B0K9 141 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 KIAA1211LQ6NV74 962 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 ZER1Q7Z7L7 766 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 PDZD9Q8IXQ8 264 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SPICQ8N5J4 248 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 OR1S1Q8NH92 325 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 DDOQ99489 341 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 TINAGQ9UJW2 476 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SCN8AQ9UQD0 1980 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 TCRBV16S1A1N1A0A5B0 115 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 ITGA10O75578 1167 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 APOC3P02656 99 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 SYPP08247 313 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 ANXA8L1Q5VT79 327 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 LYPD4Q6UWN0 246 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 MARCH9Q86YJ5 346 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 LILRB2Q8N423 598 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 DUSP26Q9BV47 211 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 CFHR5Q9BXR6 569 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms