RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 LCN1P1Q5VSP4 162 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 KIAA1211LQ6NV74 962 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ETFBKMTQ8IXQ9 262 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 Q8N402 240 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 LINC00471Q8N535 108 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ACOT4Q8N9L9 421 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 OR2A1Q8NGT9 310 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 OR4Q3Q8NH05 313 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 AP3S1Q92572 193 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ART5Q96L15 291 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 OR7D2Q96RA2 312 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ARHGAP9Q9BRR9 750 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 PINK1Q9BXM7 581 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ADAM29Q9UKF5 820 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ENTPD4Q9Y227 616 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 GABRA5P31644 462 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 HSD17B2P37059 387 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 IL12RB1P42701 662 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 LTB4RQ15722 352 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 C19orf18Q8NEA5 215 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 SUSD6Q92537 303 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 CSNK1G3Q9Y6M4 447 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 A0A0G2JPF8 293 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 HNRNPCL2B2RXH8 293 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 HNRNPCL3B7ZW38 293 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 ALPPP05187 535 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 HNRNPCL4P0DMR1 293 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 RNF144AP50876 292 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 TRAM2Q15035 370 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 Q5BKY6 102 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 NOXA1Q86UR1 476 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 DTX3Q8N9I9 347 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 GALNT6Q8NCL4 622 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 NECTIN4Q96NY8 510 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC38A1Q9H2H9 487 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 C6orf106Q9H6K1 298 aaPredicted RBP13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
GAPVD1-205ENST00000394084 SCN3AQ9NY46 2000 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 FCMRO60667 390 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 HIST1H1TP22492 207 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 CLDN2P57739 230 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 TSPAN31Q12999 210 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF438Q7Z4V0 828 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NUP43Q8NFH3 380 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 ZFPM2Q8WW38 1151 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 MS4A6EQ96DS6 147 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NT5DC2Q9H857 520 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 ASB4Q9Y574 426 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 OR6C70A6NIJ9 312 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 MAP2K3P46734 347 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 TGM3Q08188 693 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 CCDC85BQ15834 202 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 C16orf62Q7Z3J2 963 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 KLBQ86Z14 1044 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM145Q8NBT3 493 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 SPRYD4Q8WW59 207 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 RNF170Q96K19 258 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 MED18Q9BUE0 208 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 POLMQ9NP87 494 aaPredicted RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 MRPS30Q9NP92 439 aaKnown RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 NLKQ9UBE8 527 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 SNRNP200O75643 2136 aaKnown RBP13.07□□□□□ -0.32
GAPVD1-205ENST00000394084 SOCS6O14544 535 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 CASC3O15234 703 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ATP5A1P25705 553 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 IFNGR2P38484 337 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 OMPP47874 163 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 RGS8P57771 180 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TRA2BP62995 288 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PPP3R1P63098 170 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 RAB42Q8N4Z0 105 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 DIO2Q92813 273 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms